利用机器学习来预测猫的毒弧菌感染:兽医流行病学的工具。

IF 1.9 4区 医学 Q3 PARASITOLOGY
Parasitology International Pub Date : 2026-02-01 Epub Date: 2025-08-06 DOI:10.1016/j.parint.2025.103140
Petcharat Chompo, Veerasak Punyapornwithaya, Banchob Sripa, Sirikachorn Tangkawattana
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引用次数: 0

摘要

在大湄公河次区域,猫是主要的宿主,因此,猪舌绦虫感染是一个主要的公共卫生问题。虽然机器学习(ML)在人类医学中得到了广泛的应用,但它在兽医流行病学中的应用仍然有限。本研究旨在利用流行地区175户家庭的数据,开发可解释的ML模型来预测Ov感染,并确定猫的关键危险因素。使用特征选择方法、超参数调优和SMOTE对分类树、随机森林、Ridge Logistic回归(Ridge LR)、极端梯度增强和支持向量机(SVM)五种ML算法进行了优化。结果表明,最小冗余最大相关性(mRMR)的Ridge LR、调优的Ridge LR和调优的SVM均取得了可靠的性能,ROC-AUC值均超过0.7。具体来说,带有mRMR的默认Ridge LR获得了很强的平衡精度(0.722),而调谐Ridge LR获得了最高的灵敏度(0.667)。使用mRMR调整SVM的测试ROC-AUC为0.723,PR-AUC为0.473,平衡精度为0.682。SHapley加性解释(SHAP)分析确定了关键风险因素,包括居住在洪涝地区、给猫喂鱼残渣和年降雨量,强调了环境因素在Ov传播中的作用。这些发现突出了ML在兽医流行病学中的潜力,并强调了根据数据特征选择适当方法的重要性。该研究表明,针对这些关键风险因素的有针对性、基于风险的干预措施对于在流行地区有效控制Ov至关重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Leveraging machine learning for predicting Opisthorchis viverrini infection in cats: A tool for veterinary epidemiology.

Opisthorchis viverrini (Ov) infection is a major public health concern in the Greater Mekong Subregion, with cats as key reservoir hosts. Although machine learning (ML) is widely used in human medicine, its application in veterinary epidemiology remains limited. This study aimed to develop interpretable ML models to predict Ov infection and to identify key risk factors in cats using data from 175 households in endemic areas. Five ML algorithms-Classification Tree, Random Forest, Ridge Logistic Regression (Ridge LR), eXtreme Gradient Boosting, and Support Vector Machine (SVM)-were optimized using feature selection methods, hyperparameter tuning, and SMOTE. The results demonstrated that Ridge LR with Minimum Redundancy Maximum Relevance (mRMR), tuned Ridge LR, and tuned SVM achieved reliable performance, with ROC-AUC values exceeding 0.7. Specifically, default Ridge LR with mRMR achieved strong balanced accuracy (0.722), while tuned Ridge LR attained the highest sensitivity (0.667). Tuned SVM with mRMR yielded a test ROC-AUC of 0.723 and PR-AUC of 0.473, along with a balanced accuracy of 0.682. SHapley Additive exPlanations (SHAP) analysis identified key risk factors, including residence in flooded areas, feeding fish scraps to cats, and annual rainfall, emphasizing the role of environmental factors in Ov transmission. These findings highlight the potential of ML in veterinary epidemiology and emphasize the importance of selecting appropriate methods based on data characteristics. The study suggests that targeted, risk-based interventions focusing on these key risk factors are crucial for effective Ov control in endemic regions.

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来源期刊
Parasitology International
Parasitology International 医学-寄生虫学
CiteScore
4.00
自引率
10.50%
发文量
140
审稿时长
61 days
期刊介绍: Parasitology International provides a medium for rapid, carefully reviewed publications in the field of human and animal parasitology. Original papers, rapid communications, and original case reports from all geographical areas and covering all parasitological disciplines, including structure, immunology, cell biology, biochemistry, molecular biology, and systematics, may be submitted. Reviews on recent developments are invited regularly, but suggestions in this respect are welcome. Letters to the Editor commenting on any aspect of the Journal are also welcome.
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