Zhaojun Peng , Xinyue Gan , Jiaheng Liu , Bo Xin , Cheng Zhong
{"title":"利用sacb介导的木林komagataeibacter xylinus基因编辑系统,探索细菌纤维素合酶的功能。","authors":"Zhaojun Peng , Xinyue Gan , Jiaheng Liu , Bo Xin , Cheng Zhong","doi":"10.1016/j.jbiotec.2025.08.003","DOIUrl":null,"url":null,"abstract":"<div><div>Bacterial cellulose (BC) is a microbial polysaccharide, which is widely used in biotechnology, food, medicine, and other industries. Although existing genetic toolkits have laid a solid foundation for the genetic manipulation of BC-producing strains, there is still room for improvement in enhancing editing efficiency, simplifying operational procedures, and achieving scarless modifications. In the present study, we developed a SacB-based system, pK18mobsacB, to achieve marker-free gene editing with an efficiency of up to 83.33 %. Gene deletion, insertion, and replacement were successfully performed in <em>Komagataeibacter xylinus</em> CGMCC 2955 using this system. Subsequently, the SacB-based system was used to explore the function of bacterial cellulose synthase in the synthesis and structure of BC. It was found that the <em>bcs I</em> operon played an important role in BC synthesis. The deletion of the <em>bcs II</em> and <em>bcs III</em> operon regions, either individually or in combination, led to an increase in the fiber diameter and crystallinity of the BC films. The SacB-based system and its applications established in this study provide valuable tools and a theoretical foundation for the modification of BC-producing strains using synthetic biology, thereby facilitating the sustainable application of BC and the development of innovative products.</div></div>","PeriodicalId":15153,"journal":{"name":"Journal of biotechnology","volume":"407 ","pages":"Pages 48-58"},"PeriodicalIF":3.9000,"publicationDate":"2025-08-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Utilizing the SacB-mediated gene editing system in Komagataeibacter xylinus to explore the function of bacterial cellulose synthase\",\"authors\":\"Zhaojun Peng , Xinyue Gan , Jiaheng Liu , Bo Xin , Cheng Zhong\",\"doi\":\"10.1016/j.jbiotec.2025.08.003\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Bacterial cellulose (BC) is a microbial polysaccharide, which is widely used in biotechnology, food, medicine, and other industries. Although existing genetic toolkits have laid a solid foundation for the genetic manipulation of BC-producing strains, there is still room for improvement in enhancing editing efficiency, simplifying operational procedures, and achieving scarless modifications. In the present study, we developed a SacB-based system, pK18mobsacB, to achieve marker-free gene editing with an efficiency of up to 83.33 %. Gene deletion, insertion, and replacement were successfully performed in <em>Komagataeibacter xylinus</em> CGMCC 2955 using this system. Subsequently, the SacB-based system was used to explore the function of bacterial cellulose synthase in the synthesis and structure of BC. It was found that the <em>bcs I</em> operon played an important role in BC synthesis. The deletion of the <em>bcs II</em> and <em>bcs III</em> operon regions, either individually or in combination, led to an increase in the fiber diameter and crystallinity of the BC films. The SacB-based system and its applications established in this study provide valuable tools and a theoretical foundation for the modification of BC-producing strains using synthetic biology, thereby facilitating the sustainable application of BC and the development of innovative products.</div></div>\",\"PeriodicalId\":15153,\"journal\":{\"name\":\"Journal of biotechnology\",\"volume\":\"407 \",\"pages\":\"Pages 48-58\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2025-08-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of biotechnology\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0168165625001981\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of biotechnology","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0168165625001981","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
Utilizing the SacB-mediated gene editing system in Komagataeibacter xylinus to explore the function of bacterial cellulose synthase
Bacterial cellulose (BC) is a microbial polysaccharide, which is widely used in biotechnology, food, medicine, and other industries. Although existing genetic toolkits have laid a solid foundation for the genetic manipulation of BC-producing strains, there is still room for improvement in enhancing editing efficiency, simplifying operational procedures, and achieving scarless modifications. In the present study, we developed a SacB-based system, pK18mobsacB, to achieve marker-free gene editing with an efficiency of up to 83.33 %. Gene deletion, insertion, and replacement were successfully performed in Komagataeibacter xylinus CGMCC 2955 using this system. Subsequently, the SacB-based system was used to explore the function of bacterial cellulose synthase in the synthesis and structure of BC. It was found that the bcs I operon played an important role in BC synthesis. The deletion of the bcs II and bcs III operon regions, either individually or in combination, led to an increase in the fiber diameter and crystallinity of the BC films. The SacB-based system and its applications established in this study provide valuable tools and a theoretical foundation for the modification of BC-producing strains using synthetic biology, thereby facilitating the sustainable application of BC and the development of innovative products.
期刊介绍:
The Journal of Biotechnology has an open access mirror journal, the Journal of Biotechnology: X, sharing the same aims and scope, editorial team, submission system and rigorous peer review.
The Journal provides a medium for the rapid publication of both full-length articles and short communications on novel and innovative aspects of biotechnology. The Journal will accept papers ranging from genetic or molecular biological positions to those covering biochemical, chemical or bioprocess engineering aspects as well as computer application of new software concepts, provided that in each case the material is directly relevant to biotechnological systems. Papers presenting information of a multidisciplinary nature that would not be suitable for publication in a journal devoted to a single discipline, are particularly welcome.