Guyparkeria halopsychrophila sp. nov.,一种从零度以下的北极高盐温泉中分离出来的趋化石自养多极微生物。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Matthew W Quinn, Olivia Blenner-Hassett, Scott Sugden, Lochlan Breckenridge, Lyle G Whyte
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引用次数: 0

摘要

从加拿大Nunavut Qikiqtaaluk地区Axel Heiberg岛Lost Hammer和Gypsum Hill泉水系统的高北极高盐硫磺泉沉积物中分离到两株嗜嗜嗜盐和嗜盐的硫氧化细菌LHSS19-1T和GHLCS8-2。这些菌株是专性化能自养生物,利用还原硫化合物(硫代硫酸盐、硫化物、四硫酸盐和单质硫)作为电子供体和能量来源。在-2 ~ 37℃、pH 6.5 ~ 9.5、NaCl浓度为1 ~ 20% w/v的条件下,对硫代硫酸盐进行了化学岩石自养生长。DNA G+C含量为64.59 ~ 64.74 mol%。基于16S rRNA基因序列、92个单拷贝核心基因和全基因组的系统发育分析表明,这两个菌株在盖帕克菌属中形成了一个独特的单系分支。此外,在硅DNA-DNA杂交中,各菌株与最近亲缘型菌株的同源平均nt同源性和平均aa同源性分别≤69.10%、87.83%和90.37%。这两种菌株的基因组都编码高氧亲和力的cbb3型细胞色素c氧化酶基因,但明显缺乏一整套完整的aa3型细胞色素c氧化酶基因。菌株LHSS19-1T的主要呼吸醌为泛素-8。主要脂肪酸(bbb10 %)为c18.1 ω7c、c12.0 ω 3OH和c16.0 ω。根据表型和基因型结果,菌株LHSS19-1T和GHLCS8-2代表了Guyparkeria属的一个新种,并建议将其命名为Guyparkeria halopsychrophila sp. 11。型应变为LHSS19-1T (=NCTC 15100T=DSM 117890T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Guyparkeria halopsychrophila sp. nov., a chemolithoautotrophic polyextremophile isolated from a sub-zero Arctic hypersaline spring.

Two eurypsychrophilic and halophilic sulphur-oxidizing bacterial strains (LHSS19-1T and GHLCS8-2) were isolated from High Arctic hypersaline sulphur spring sediment samples collected from the Lost Hammer and Gypsum Hill spring systems on Axel Heiberg Island in the Qikiqtaaluk Region, Nunavut, Canada. The strains were obligate chemolithoautotrophs, utilizing reduced sulphur compounds (thiosulphate, sulphide, tetrathionate and elemental sulphur) as electron donors and energy sources. Chemolithoautotrophic growth on thiosulphate was observed at -2 to 37 °C, pH 6.5-9.5 and NaCl concentrations of 1-20 % w/v. The DNA G+C content of the draft genome sequences was 64.59-64.74 mol%. Phylogenetic analyses based on 16S rRNA gene sequences, 92 single-copy core genes and whole genomes indicated that both strains together form a distinct monophyletic clade within the genus Guyparkeria. Moreover, in silico DNA-DNA hybridization, orthologous average nt identity and average aa identity values calculated between each strain and the closest related type strains were ≤69.10%, 87.83% and 90.37%, respectively. The genomes of both strains encoded high O2 affinity cbb3-type cytochrome c oxidase genes but distinctively lacked a complete set of aa3-type cytochrome c oxidase genes. The dominant respiratory quinone of strain LHSS19-1T was ubiquinone-8. The major fatty acids (>10%) were C18 : 1ω7c, C12 : 0 3OH and C16 : 0. Based on phenotypic and genotypic results, strains LHSS19-1T and GHLCS8-2 represent a novel species within the genus Guyparkeria, for which the name Guyparkeria halopsychrophila sp. nov. is proposed. The type strain is LHSS19-1T (=NCTC 15100T=DSM 117890T).

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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