马来西亚链霉菌亚种。samsunensis梳子。11 . solisilvae Streptomyces Zhou et al. 2017作为Streptomyces malaysiensis al - tai et al. 1999的异型同义词的重新分类。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Hisayuki Komaki
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引用次数: 0

摘要

对马来西亚链霉菌al - tai等(1999)、samsunensis Sazak等(2011)和solisilvae Streptomyces Zhou等(2017)的分类关系进行了研究。系统发育分析表明这三个物种亲缘关系密切。马来西亚山竹JCM 10672T和S. solisilvae HNM0141T的数字DNA-DNA杂交值和基于blast+的平均核苷酸一致性分别为99.8%和99.9%,而samsunensis DSM 42010T与其余两者的数字DNA-DNA杂交值分别为75.4-75.6和95.0-96.5%。除了对肌醇和d-木糖的利用不同外,它们的主要表型特征相似。所有的i型多酮合成酶(PKS)和非核糖体肽合成酶(NRPS)基因簇在马来西亚葡萄球菌和山竹葡萄球菌型菌株之间都是保守的,但samsunensis型菌株具有4个特异性PKS和NRPS基因簇,而马来西亚葡萄球菌和山竹葡萄球菌型菌株共有11个特异性PKS和NRPS基因簇。因此,s.s solisilvae和s.s samsunensis被重新归类为s.s malaysiensis和s.s malaysiensis亚种的后异型同系物。samsunensis梳子。11月,分别。在此基础上,对已发表的与该物种相关的非型菌株全基因组序列的学名进行了综述和更新。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Streptomyces malaysiensis subsp. samsunensis comb. nov. and reclassification of Streptomyces solisilvae Zhou et al. 2017 as a heterotypic synonym of Streptomyces malaysiensis Al-Tai et al. 1999.

Taxonomic relationships were investigated among Streptomyces malaysiensis Al-Tai et al. 1999, Streptomyces samsunensis Sazak et al. 2011 and Streptomyces solisilvae Zhou et al. 2017. Phylogenetic analyses suggested that these three species are closely related. Digital DNA-DNA hybridization value and average nucleotide identity based on blast+ between S. malaysiensis JCM 10672T and S. solisilvae HNM0141T were 99.8 and 99.9%, whereas those between S. samsunensis DSM 42010T and the remaining two were 75.4-75.6 and 95.0-96.5%, respectively. Their major phenotypic characteristics resembled each other except for the utilizations of myo-inositol and d-xylose by S. samsunensis. All the type-I polyketide synthase (PKS) and non-ribosomal peptide synthetase (NRPS) gene clusters were conserved between type strains of S. malaysiensis and S. solisilvae, but the type strain of S. samsunensis harboured 4 specific PKS and NRPS gene clusters instead of 11 clusters present in type strains of S. malaysiensis and S. solisilvae. Therefore, S. solisilvae and S. samsunensis were reclassified as a later heterotypic synonym of S. malaysiensis and S. malaysiensis subsp. samsunensis comb. nov., respectively. Based on the reclassifications, scientific names of whole genome sequence-published non-type strains related to the species were reviewed and updated.

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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