幼体斑马鱼在三维空间的游泳回合揭示了新的和多余的行为。

IF 3.5 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Journal of The Royal Society Interface Pub Date : 2025-08-01 Epub Date: 2025-08-06 DOI:10.1098/rsif.2025.0065
Aniket Ravan, Yann R Chemla, Martin Gruebele
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引用次数: 0

摘要

对斑马鱼幼鱼的二维游动进行了广泛的研究。我们使用三维成像系统和神经网络进行姿态估计来研究它们的三维行为。我们回答了两个问题:(i)从自由游泳、暗闪和声惊实验中自发或延迟发作的转向是否客观可区分?(ii)幼虫是否可以在反应中使用随机选择,在逃跑过程中“佯装”?我们的分析确定了两种新的主要背腹移位模式。游泳的前半个周期包含了区分行为的大部分信息。先前应用于线虫和果蝇的降维揭示了四类游泳行为:先前分类的短潜伏期c型转弯(slc), o型转弯,自由游泳和我们称之为“自愿转弯”的行为,包括自由游泳时的转弯和黑暗闪光和声惊吓实验中的时间延迟转弯,即使在分析中包含额外的半周期,也无法区分。与以前的聚类分析不同,我们提供了两个坐标方面的行为聚类的物理图像。幼虫还会有一种新的行为:SLC的垂直部分使动物能够延长初始方向或在中间切换方向。我们将这种行为合理化为对捕食者逃避的佯装反应。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Larval zebrafish swim bouts in three dimensions reveal both new and redundant behaviours.

Two-dimensional swimming of larval zebrafish has been studied extensively. We use a three-dimensional imaging system and neural network for pose estimation to study their three-dimensional behaviour. We answer two questions: (i) are spontaneous or delayed-onset turns from free swim, dark flash and acoustic startle experiments objectively differentiable? and (ii) could larvae use stochastic selection among responses, 'feinting' during an escape? Our analysis identifies two new major modes of dorso-ventral displacement. The first half-cycle of swim bouts contains most of the information to distinguish behaviours. Dimensionality reduction as previously applied to nematodes and fruit flies reveals four clusters of swimming behaviour: the previously classified short-latency C-turns (SLCs), O-turns, free swims and a behaviour we term 'voluntary turn', which comprises turns during free swimming and time-delayed turns during dark flash and acoustic startle experiments that cannot be distinguished even when additional half-cycles are included in the analysis. Unlike previous clustering analyses, we provide a physical picture of behavioural clusters in terms of two coordinates. The larvae also engage in a new behaviour: the vertical component of the SLC enables the animal to either extend the initial direction or switch it in the middle. We rationalize this behaviour as a feinting response for predator evasion.

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来源期刊
Journal of The Royal Society Interface
Journal of The Royal Society Interface 综合性期刊-综合性期刊
CiteScore
7.10
自引率
2.60%
发文量
234
审稿时长
2.5 months
期刊介绍: J. R. Soc. Interface welcomes articles of high quality research at the interface of the physical and life sciences. It provides a high-quality forum to publish rapidly and interact across this boundary in two main ways: J. R. Soc. Interface publishes research applying chemistry, engineering, materials science, mathematics and physics to the biological and medical sciences; it also highlights discoveries in the life sciences of relevance to the physical sciences. Both sides of the interface are considered equally and it is one of the only journals to cover this exciting new territory. J. R. Soc. Interface welcomes contributions on a diverse range of topics, including but not limited to; biocomplexity, bioengineering, bioinformatics, biomaterials, biomechanics, bionanoscience, biophysics, chemical biology, computer science (as applied to the life sciences), medical physics, synthetic biology, systems biology, theoretical biology and tissue engineering.
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