{"title":"机器学习训练的可切换蛋白结构域插入设计。","authors":"Noah Holzleitner, Julian Grünewald","doi":"10.1038/s41592-025-02766-4","DOIUrl":null,"url":null,"abstract":"ProDomino is a machine-learning model that efficiently predicts domain insertion sites in host proteins on the basis of amino acid sequence alone. The model enables the greatly accelerated design of functional multi-domain proteins, such as light-triggered or drug-triggered protein switches.","PeriodicalId":18981,"journal":{"name":"Nature Methods","volume":"22 8","pages":"1629-1631"},"PeriodicalIF":32.1000,"publicationDate":"2025-08-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Machine learning-trained protein domain insertion for the design of switchable proteins\",\"authors\":\"Noah Holzleitner, Julian Grünewald\",\"doi\":\"10.1038/s41592-025-02766-4\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"ProDomino is a machine-learning model that efficiently predicts domain insertion sites in host proteins on the basis of amino acid sequence alone. The model enables the greatly accelerated design of functional multi-domain proteins, such as light-triggered or drug-triggered protein switches.\",\"PeriodicalId\":18981,\"journal\":{\"name\":\"Nature Methods\",\"volume\":\"22 8\",\"pages\":\"1629-1631\"},\"PeriodicalIF\":32.1000,\"publicationDate\":\"2025-08-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Nature Methods\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.nature.com/articles/s41592-025-02766-4\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Nature Methods","FirstCategoryId":"99","ListUrlMain":"https://www.nature.com/articles/s41592-025-02766-4","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Machine learning-trained protein domain insertion for the design of switchable proteins
ProDomino is a machine-learning model that efficiently predicts domain insertion sites in host proteins on the basis of amino acid sequence alone. The model enables the greatly accelerated design of functional multi-domain proteins, such as light-triggered or drug-triggered protein switches.
期刊介绍:
Nature Methods is a monthly journal that focuses on publishing innovative methods and substantial enhancements to fundamental life sciences research techniques. Geared towards a diverse, interdisciplinary readership of researchers in academia and industry engaged in laboratory work, the journal offers new tools for research and emphasizes the immediate practical significance of the featured work. It publishes primary research papers and reviews recent technical and methodological advancements, with a particular interest in primary methods papers relevant to the biological and biomedical sciences. This includes methods rooted in chemistry with practical applications for studying biological problems.