Ovoidimarina sediminis gen. nov., sp. nov.,一个从潮滩沉积物中分离出来的玫瑰杆菌科新成员。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Akila Kathiresan, Jaincy N Jayan, Hee-Su Kim, Hyung-Seop Kim, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
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引用次数: 0

摘要

从韩国高敞大潮蛤养殖场收集的潮滩沉积物中分离出一种严格需氧、革兰氏染色阴性、卵形和不活动的细菌,命名为菌株MJ-SS7T。菌株MJ-SS7T表现出氧化酶和过氧化氢酶阳性活性。生长条件为20-37℃(最适30℃),pH 6-8(最适pH 7), NaCl浓度为0-9% (w/v)(最适3%)。基于16S rRNA基因序列的系统发育分析表明,MJ-SS7T属于玫瑰杆菌科。基于序列相似性,其最近的亲缘关系为Rhodophyticola porphyridii KACC 18805T(95.9%)、Kangsaoukella pontilimi KCTC 72224T(95.8%)和pelagium Actibacterium JN33T(95.5%)。主要脂肪酸有总特征8 (C18:1 ω7c/C18:1 ω6c)、C16:0、C16:0 2OH和C18:0。主要极性脂类包括磷脂酰甘油、5种未识别的磷脂、4种未识别的氨基脂、2种未识别的氨基磷脂和4种未识别的脂类。主要的呼吸醌是泛醌-10。基因组大小为5.20 Mb, DNA G+C含量为63.4 mol%,编码5031个蛋白质编码基因、3个rRNA基因和46个tRNA基因。比较基因组分析证实了它的新颖性,具有平均核苷酸同一性(T代表玫瑰杆菌科新属的新种,因此建议将其命名为Ovoidimarina sediminis gen. nov., sp. nov.)。型应变为MJ-SS7T (=KEMB 21436T=KCTC 8329T=JCM 36750T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Ovoidimarina sediminis gen. nov., sp. nov., a novel member of the Roseobacteraceae isolated from tidal flat sediment.

A strictly aerobic, Gram-stain-negative, ovoid-shaped and non-motile bacterium, designated as strain MJ-SS7T, was isolated from tidal mudflat sediment collected at a macro-tidal clam farm in Gochang, Republic of Korea. Strain MJ-SS7T exhibited oxidase- and catalase-positive activities. Growth occurred at 20-37 °C (optimum: 30 °C), pH 6-8 (optimum: pH 7) and in the presence of 0-9% (w/v) NaCl (optimum: 3%). Phylogenetic analysis based on 16S rRNA gene sequences revealed that MJ-SS7T belonged to the family Roseobacteraceae. Its closest relatives, based on sequence similarity, were Rhodophyticola porphyridii KACC 18805T (95.9%), Kangsaoukella pontilimi KCTC 72224T (95.8%) and Actibacterium pelagium JN33T (95.5%). The major fatty acids included summed feature 8 (C18:1  ω7c/C18:1  ω6c), C16:0, C16:0 2OH and C18:0. The major polar lipids consisted of phosphatidylglycerol, five unidentified phospholipids, four unidentified aminolipids, two unidentified aminophospholipids and four unidentified lipids. The major respiratory quinone was ubiquinone-10. The genome size was 5.20 Mb, with a DNA G+C content of 63.4 mol%, encoding 5,031 protein-coding genes, 3 rRNA genes and 46 tRNA genes. Comparative genomic analyses confirmed its novelty, with average nucleotide identity (<73%) and average amino acid identity (<70%) values below the species delineation thresholds. Based on polyphasic taxonomic data, strain MJ-SS7T represents a novel species of a new genus within the family Roseobacteraceae, for which the name Ovoidimarina sediminis gen. nov., sp. nov. is proposed. The type strain is MJ-SS7T (=KEMB 21436T=KCTC 8329T=JCM 36750T).

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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