铁常规凝血和电凝法对尾状病毒替代物的简易控制。

IF 11.3 1区 环境科学与生态学 Q1 ENGINEERING, ENVIRONMENTAL
Kyungho Kim, Anindito Sen and Shankararaman Chellam*, 
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引用次数: 0

摘要

FeCl3常规凝血和Fe(0)电凝对长尾体噬菌体P1均有较好的抑制作用。我们的目标是肠杆菌噬菌体,因为它们比粪便指示菌更好地跟踪病毒病原体的环境持久性及其在废水处理装置操作中的命运。完整/受损P1的低温电子显微镜(cryo-EM)和通过空斑测定对感染病毒粒子的计数表明,通过去除和灭活来控制。低温单粒子分析与低温电子断层扫描相结合,生成三维电子密度图,以可视化和分析未经处理和凝固的衣壳。据我们所知,这是第一个用低温电镜观察与环境相关的结构受损病毒的报告。病毒本质上被包裹在与扫描凝固一致的沉淀物中。获得了多种失活机制的直接证据,包括(i)衣壳断裂导致病毒基因组和其他成分泄漏,(ii)衣壳蛋白变形和变薄,(iii)尾部附着在衣壳上的颈部区域断裂/损伤,(iv)尾部部分的移除、断裂和分裂,以及(v)基板损伤(包括受体结合蛋白)。蛋白质构象改变、二级结构改变以及与絮凝体的特异性相互作用都是由两种凝固方法的红外光谱推断出来的。然而,只能电凝氧化蛋白。P1的极易还原表明,具有肌病毒形态的噬菌体可能不是测量对数还原值的保守替代品,用于铁常规凝血和电凝血的调节目的和公共健康保护。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Facile Control of a Tailed Virus Surrogate by Iron Conventional Coagulation and Electrocoagulation

Both FeCl3 conventional coagulation and Fe(0) electrocoagulation were highly effective in mitigating the long-tailed somatic phage P1. We targeted enterobacterial coliphages because they are better than fecal indicator bacteria in tracking environmental persistence of viral pathogens and their fate in wastewater unit operations. Cryogenic electron microscopy (cryo-EM) of intact/damaged P1 and enumeration of infective virions by plaque assays demonstrated control via both removal and inactivation. Cryo-single particle analysis was coupled with cryo-electron tomography to generate 3-dimensional electron density maps to visualize and analyze untreated and coagulated capsids. To our knowledge, this is the first report of cryo-EM to visualize structurally damaged viruses with environmental relevance. Viruses were intrinsically enmeshed in precipitates consistent with sweep coagulation. Direct evidence of multiple inactivation mechanisms was obtained including (i) capsid breakage leading to leakage of viral genome and other components, (ii) deformation and thinning of capsid proteins, (iii) severance/damages to the neck region where the tail is attached to the capsid, (iv) removal, fragmentation, and splintering of tail sections, and (v) baseplate damage (including receptor-binding proteins). Conformational alterations to proteins, changes to secondary structures, and specific interactions with flocs were inferred from infrared spectroscopy for both coagulation approaches. However, only electrocoagulation oxidized proteins. Extremely facile reduction of P1 suggested that coliphages with myovirus morphology may not be conservative surrogates to measure log reduction values for regulatory purposes and public health protection by iron conventional coagulation and electrocoagulation.

Iron coagulation easily removed/inactivated the tailed somatic coliphage P1, which was analyzed by cryogenic electron microscopy and infrared spectroscopy revealing extensive structural degradation.

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来源期刊
环境科学与技术
环境科学与技术 环境科学-工程:环境
CiteScore
17.50
自引率
9.60%
发文量
12359
审稿时长
2.8 months
期刊介绍: Environmental Science & Technology (ES&T) is a co-sponsored academic and technical magazine by the Hubei Provincial Environmental Protection Bureau and the Hubei Provincial Academy of Environmental Sciences. Environmental Science & Technology (ES&T) holds the status of Chinese core journals, scientific papers source journals of China, Chinese Science Citation Database source journals, and Chinese Academic Journal Comprehensive Evaluation Database source journals. This publication focuses on the academic field of environmental protection, featuring articles related to environmental protection and technical advancements.
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