基于空间聚类的传染病监测网络设计方法:以手足口病为例。

IF 5.5 1区 医学
Shuting Li, Yuanhua Liu, Ke Li, Zengliang Wang, Michael P Ward, Wei Tu, Jiayao Xu, Rui Yuan, Lele Zhang, Na Wang, Jidan Zhang, Yu Zhao, Henry S Lynn, Zhaorui Chang, Zhijie Zhang
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引用次数: 0

摘要

背景:有效监测传染病对保障公众健康至关重要。与全国范围的综合监测相比,选择有代表性的样本城市组成监测网络进行监测,以较低的成本提供了相似的效果。采用空间聚类分层抽样(SCSS)方法,选取具有空间自相关性的传染病样本城市。方法:为提高手足口病(手足口病)监测效率,采用SCSS设计监测网络,主要分为四个步骤。首先,我们使用空间聚类分析(Spatial Kluster Analysis by Tree Edge Removal, SKATER)对数据进行分层。其次,运用成本效益平衡法确定最优样本量。第三,在每个地层内进行简单随机抽样,建立初始监测网络。第四,采用循环优化方法确定监测网络。我们使用均方根误差(RMSE)、Spearman等级相关、全局Moran’s I、局部Getis-Ord G*和连接点回归来评估时空代表性。我们还比较了SCSS与K-means、传统分层抽样和使用RMSE的简单随机抽样的有效性。结果:确定最佳样本量为103份。总体而言,各城市的预测值与真实值显著相关(r = 0.81, P = 0, P)。结论:SCSS比忽略空间信息的传统方法更准确、更稳定。该方法为今后设计具有空间自相关性的传染病监测网络提供了有价值的参考,可实现更高效、更经济的监测。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A spatial clustering-based approach to design monitoring networks of infectious diseases: a case study of hand, foot, and mouth disease.

Background: Effective monitoring of infectious diseases is crucial for safeguarding public health. Compared to comprehensive nationwide surveillance, selecting representative sample cities to constitute the monitoring network for surveillance provides similar effectiveness at a lower cost. We developed Spatial Cluster Stratified Sampling (SCSS) to select sample cities for infectious diseases exhibiting spatial autocorrelation.

Methods: To improve monitoring efficiency for hand, foot, and mouth disease (HFMD), we used SCSS to design a monitoring network, which involved four main steps. First, we used Spatial Kluster Analysis by Tree Edge Removal (SKATER) to stratify the data. Second, we applied the cost-benefit balance to determine the optimal sample size. Third, we performed simple random sampling within each stratum to establish an initial monitoring network. Fourth, we used cyclic optimization to finalize the monitoring network. We evaluated the spatiotemporal representativeness using root mean square error (RMSE), Spearman's rank correlation, global Moran's I, local Getis-Ord G*, and Joinpoint Regression. We also compared the effectiveness of SCSS with K-means, traditional stratified sampling, and simple random sampling using RMSE.

Results: The optimal sample size was determined to be 103. Overall, the predicted values for each city significantly correlated with the true values (r = 0.81, P < 0.001). Both the predicted and true values showed positive spatial autocorrelation (Moran's I > 0, P < 0.05), and the sensitivity, specificity, and accuracy of the predicted local Getis-Ord G* values, evaluated against the true values as the gold standard, were 0.76, 0.91, and 0.87, respectively. The weekly predicted values for each city showed significant correlation with the true values (P < 0.05). The 95% confidence intervals (CI) for the predicted values of joinpoint locations, annual percent change (APC), and average annual percent change (AAPC) encompassed the true values, and the number of joinpoints matched the true values. Among the four methods compared, SCSS exhibited the lowest and most centralized RMSE.

Conclusions: SCSS proved to be more accurate and stable than traditional methods, which overlook spatial information. This method offers a valuable reference for future design of monitoring networks for infectious diseases exhibiting spatial autocorrelation, enabling more efficient and cost-effective surveillance.

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来源期刊
Infectious Diseases of Poverty
Infectious Diseases of Poverty INFECTIOUS DISEASES-
自引率
1.20%
发文量
368
期刊介绍: Infectious Diseases of Poverty is an open access, peer-reviewed journal that focuses on addressing essential public health questions related to infectious diseases of poverty. The journal covers a wide range of topics including the biology of pathogens and vectors, diagnosis and detection, treatment and case management, epidemiology and modeling, zoonotic hosts and animal reservoirs, control strategies and implementation, new technologies and application. It also considers the transdisciplinary or multisectoral effects on health systems, ecohealth, environmental management, and innovative technology. The journal aims to identify and assess research and information gaps that hinder progress towards new interventions for public health problems in the developing world. Additionally, it provides a platform for discussing these issues to advance research and evidence building for improved public health interventions in poor settings.
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