希瓦氏菌MR-1对环境底物的细胞外催化作用是通过MtrC c端结构域的活性位点发生的。

IF 5.2 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Protein Science Pub Date : 2025-08-01 DOI:10.1002/pro.70243
Alejandro Morales-Florez, Colin W J Lockwood, Benjamin W Nash, Marcus J Edwards, Jessica H van Wonderen, Amit Sachdeva, Julea N Butt, Thomas A Clarke
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引用次数: 0

摘要

革兰氏阴性Shewanellaceae家族以其通过渗透外膜的电子导管将分解代谢衍生的电子转移到细胞外末端电子受体的能力而闻名。主要的导管是MtrCAB,这是一种三聚体孔蛋白-细胞色素复合物,含有细胞表面暴露的十烯基细胞色素MtrC。这将电子提供给细胞外底物,包括OmcA、可溶性金属、有机电子穿梭体和不溶性金属氧化物。然而,目前尚不清楚这种广泛的底物特异性是否需要特定的结合和还原位点,或者是否通过细胞色素表面暴露血红素附近的非特异性相互作用发生还原。希瓦氏菌MtrC由四个结构域组成,其中血红素紧密排列并均匀分布在结构域II和结构域IV之间。这些结构域的排列允许电子通过结构域间的电子转移在细胞色素上传递,但这种保守特征的意义尚不清楚。在这里,我们使用定点诱变产生仅由结构域I和II组成的MtrC变体(MtrCDI,II)。该MtrCDI、II的性质与全长MtrC的结构域I和II有效相同。全细胞实验显示,用MtrCDI、II替代全长MtrC的同属藤细胞具有显著降低的OmcA、黄素单核苷酸和铁(III)柠檬酸还原率。我们的研究结果表明,MtrC结构域III和IV包含特定底物结合的位点,使野刺草的细胞外电子受体减少。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Extracellular catalysis of environmental substrates by Shewanella oneidensis MR-1 occurs via active sites on the C-terminal domains of MtrC.

The Gram-negative Shewanellaceae family is well known for its ability to transfer catabolically derived electrons to extracellular terminal electron acceptors through electron conduits that permeate the outer membrane. The primary conduit is MtrCAB, a trimeric porin-cytochrome complex that contains the cell surface exposed decaheme cytochrome MtrC. This donates electrons to extracellular substrates, including OmcA, soluble metals, organic electron shuttles, and insoluble metal oxides. However, it is not clear whether this broad substrate specificity requires specific sites for binding and reduction, or whether reduction occurs through non-specific interactions near exposed hemes on the cytochrome surface. Shewanella oneidensis MtrC is composed of four domains, with the hemes closely packed and distributed evenly between domains II and IV. The domains are arranged to allow electron transport across the cytochrome via interdomain electron transfer, but the significance of this conserved feature is not understood. Here we use site-directed mutagenesis to generate an MtrC variant that is comprised only of domains I and II (MtrCDI,II). The properties of this MtrCDI,II are effectively identical to domains I and II of full-length MtrC. Whole-cell assays revealed that S. oneidensis cells replacing full-length MtrC with MtrCDI,II had significantly lower rates of OmcA, flavin mononucleotide, and Fe(III) citrate reduction. Our results demonstrate that MtrC domains III and IV contain sites for association of specific substrates, enabling the reduction of extracellular electron acceptors in S. oneidensis.

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来源期刊
Protein Science
Protein Science 生物-生化与分子生物学
CiteScore
12.40
自引率
1.20%
发文量
246
审稿时长
1 months
期刊介绍: Protein Science, the flagship journal of The Protein Society, is a publication that focuses on advancing fundamental knowledge in the field of protein molecules. The journal welcomes original reports and review articles that contribute to our understanding of protein function, structure, folding, design, and evolution. Additionally, Protein Science encourages papers that explore the applications of protein science in various areas such as therapeutics, protein-based biomaterials, bionanotechnology, synthetic biology, and bioelectronics. The journal accepts manuscript submissions in any suitable format for review, with the requirement of converting the manuscript to journal-style format only upon acceptance for publication. Protein Science is indexed and abstracted in numerous databases, including the Agricultural & Environmental Science Database (ProQuest), Biological Science Database (ProQuest), CAS: Chemical Abstracts Service (ACS), Embase (Elsevier), Health & Medical Collection (ProQuest), Health Research Premium Collection (ProQuest), Materials Science & Engineering Database (ProQuest), MEDLINE/PubMed (NLM), Natural Science Collection (ProQuest), and SciTech Premium Collection (ProQuest).
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