{"title":"黑曲霉FS054产果糖转移酶发酵工艺的优化","authors":"Yingzi Wu, Yuewen Zhang, Xiaoyu Zhong, Huiling Xia, Mingyang Zhou, Wenjin He, Yi Zheng","doi":"10.1186/s12934-025-02798-7","DOIUrl":null,"url":null,"abstract":"<p><p>This study systematically optimized the fermentation process for fructosyltransferase (FTase) production by Aspergillus niger FS054, integrating traditional experimental designs with machine learning approaches. Single-factor experiments initially identified critical medium components (carbon source, nitrogen sources, phosphate, and metal ions) and cultivation parameters (pH, liquid volume, inoculum size, temperature, and shaking speed). Subsequent Plackett-Burman screening identified sucrose, yeast extract paste, and <math> <mrow><msub><mtext>NH</mtext> <mn>4</mn></msub> <mtext>Cl</mtext></mrow> </math> as the most influential medium factors. Through Box-Behnken response surface methodology (RSM), the optimal medium composition was determined as sucrose 156.65 g/L, yeast extract paste 42 g/L, and <math> <mrow><msub><mtext>NH</mtext> <mn>4</mn></msub> <mtext>Cl</mtext></mrow> </math> 1.68 g/L, yielding an enzyme activity of 3249.00 ± 24.39 U/L (99.16% agreement with RSM predictions). Further optimization of cultivation conditions using a hybrid backpropagation neural network-genetic algorithm (BP-GA) model identified optimal parameters as pH 5.5, a liquid volume of 96.6 mL (in a 250 mL shaker), and inoculum size of 2.4 <math><mo>×</mo></math> <math><msup><mn>10</mn> <mn>4</mn></msup> </math> spores/mL, achieving a final enzyme activity of 3422.14 ± 36.86 U/L (1.1% deviation from the predicted 3460 U/L), representing a 4.2-fold increase over initial conditions. This work demonstrates the synergistic application of classical experimental design and artificial intelligence, significantly enhancing FTase productivity and potentially offering a more economical enzyme source for industrial-scale fructooligosaccharide (FOS) biosynthesis.</p>","PeriodicalId":18582,"journal":{"name":"Microbial Cell Factories","volume":"24 1","pages":"173"},"PeriodicalIF":4.9000,"publicationDate":"2025-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12302737/pdf/","citationCount":"0","resultStr":"{\"title\":\"Optimization of the fermentation process for fructosyltransferase production by Aspergillus niger FS054.\",\"authors\":\"Yingzi Wu, Yuewen Zhang, Xiaoyu Zhong, Huiling Xia, Mingyang Zhou, Wenjin He, Yi Zheng\",\"doi\":\"10.1186/s12934-025-02798-7\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>This study systematically optimized the fermentation process for fructosyltransferase (FTase) production by Aspergillus niger FS054, integrating traditional experimental designs with machine learning approaches. Single-factor experiments initially identified critical medium components (carbon source, nitrogen sources, phosphate, and metal ions) and cultivation parameters (pH, liquid volume, inoculum size, temperature, and shaking speed). Subsequent Plackett-Burman screening identified sucrose, yeast extract paste, and <math> <mrow><msub><mtext>NH</mtext> <mn>4</mn></msub> <mtext>Cl</mtext></mrow> </math> as the most influential medium factors. Through Box-Behnken response surface methodology (RSM), the optimal medium composition was determined as sucrose 156.65 g/L, yeast extract paste 42 g/L, and <math> <mrow><msub><mtext>NH</mtext> <mn>4</mn></msub> <mtext>Cl</mtext></mrow> </math> 1.68 g/L, yielding an enzyme activity of 3249.00 ± 24.39 U/L (99.16% agreement with RSM predictions). Further optimization of cultivation conditions using a hybrid backpropagation neural network-genetic algorithm (BP-GA) model identified optimal parameters as pH 5.5, a liquid volume of 96.6 mL (in a 250 mL shaker), and inoculum size of 2.4 <math><mo>×</mo></math> <math><msup><mn>10</mn> <mn>4</mn></msup> </math> spores/mL, achieving a final enzyme activity of 3422.14 ± 36.86 U/L (1.1% deviation from the predicted 3460 U/L), representing a 4.2-fold increase over initial conditions. This work demonstrates the synergistic application of classical experimental design and artificial intelligence, significantly enhancing FTase productivity and potentially offering a more economical enzyme source for industrial-scale fructooligosaccharide (FOS) biosynthesis.</p>\",\"PeriodicalId\":18582,\"journal\":{\"name\":\"Microbial Cell Factories\",\"volume\":\"24 1\",\"pages\":\"173\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2025-07-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12302737/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Microbial Cell Factories\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1186/s12934-025-02798-7\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Microbial Cell Factories","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1186/s12934-025-02798-7","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
Optimization of the fermentation process for fructosyltransferase production by Aspergillus niger FS054.
This study systematically optimized the fermentation process for fructosyltransferase (FTase) production by Aspergillus niger FS054, integrating traditional experimental designs with machine learning approaches. Single-factor experiments initially identified critical medium components (carbon source, nitrogen sources, phosphate, and metal ions) and cultivation parameters (pH, liquid volume, inoculum size, temperature, and shaking speed). Subsequent Plackett-Burman screening identified sucrose, yeast extract paste, and as the most influential medium factors. Through Box-Behnken response surface methodology (RSM), the optimal medium composition was determined as sucrose 156.65 g/L, yeast extract paste 42 g/L, and 1.68 g/L, yielding an enzyme activity of 3249.00 ± 24.39 U/L (99.16% agreement with RSM predictions). Further optimization of cultivation conditions using a hybrid backpropagation neural network-genetic algorithm (BP-GA) model identified optimal parameters as pH 5.5, a liquid volume of 96.6 mL (in a 250 mL shaker), and inoculum size of 2.4 spores/mL, achieving a final enzyme activity of 3422.14 ± 36.86 U/L (1.1% deviation from the predicted 3460 U/L), representing a 4.2-fold increase over initial conditions. This work demonstrates the synergistic application of classical experimental design and artificial intelligence, significantly enhancing FTase productivity and potentially offering a more economical enzyme source for industrial-scale fructooligosaccharide (FOS) biosynthesis.
期刊介绍:
Microbial Cell Factories is an open access peer-reviewed journal that covers any topic related to the development, use and investigation of microbial cells as producers of recombinant proteins and natural products, or as catalyzers of biological transformations of industrial interest. Microbial Cell Factories is the world leading, primary research journal fully focusing on Applied Microbiology.
The journal is divided into the following editorial sections:
-Metabolic engineering
-Synthetic biology
-Whole-cell biocatalysis
-Microbial regulations
-Recombinant protein production/bioprocessing
-Production of natural compounds
-Systems biology of cell factories
-Microbial production processes
-Cell-free systems