利用多态分子力学评估半硫靛蓝基光开关的动力学。

IF 2.8 2区 化学 Q3 CHEMISTRY, PHYSICAL
Elias Harrer, Carolin Müller, Henry Dube and Dirk Zahn*, 
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引用次数: 0

摘要

我们概述了一个多态分子力学模型,分别用于描述基态和激发态(T1)的半硫靛蓝基光开关。在保持相关Born-Oppenheimer势能分布的接近量子力学精度的同时,我们的方法的计算效率提供了具有复杂系统扩展统计的ns尺度分子动力学模拟运行。对比一系列不同的环境,我们从能量学和动力学两个方面阐明了溶剂对三层表面的Z-E转换的显式影响。利用数以千计的轨迹,从统计抽样中直接评估异构化比率和振动松弛时间。在此基础上,通过轨迹提交者分析,揭示了Z-E异构化过程的关键描述符,实现了深入的机制理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Assessing the Dynamics of Hemithioindigo-Based Photoswitches Using Multistate Molecular Mechanics

Assessing the Dynamics of Hemithioindigo-Based Photoswitches Using Multistate Molecular Mechanics

We outline a multistate molecular mechanics model for describing hemithioindigo-based photoswitches in the ground and excited (T1) states, respectively. While retaining near quantum mechanical accuracy of the related Born–Oppenheimer potential energy profiles, the computational efficiency of our approach offers ns-scale molecular dynamics simulation runs featuring extended statistics of complex systems. Contrasting a series of different environments, we elucidate the explicit solvent effect on Z-E switching from the triplet-surface in terms of both energetics and kinetic aspects. Using thousands of trajectories, isomerization ratios and vibrational relaxation times are directly assessed from statistical sampling. On this basis, in-depth mechanistic understanding is achieved via trajectory committor analyses that unravel the key descriptors of the Z–E isomerization process.

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来源期刊
The Journal of Physical Chemistry A
The Journal of Physical Chemistry A 化学-物理:原子、分子和化学物理
CiteScore
5.20
自引率
10.30%
发文量
922
审稿时长
1.3 months
期刊介绍: The Journal of Physical Chemistry A is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, and chemical physicists.
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