斑马鱼感染海洋分枝杆菌后的代谢变化:一项广泛靶向的代谢组学分析

IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Metabolites Pub Date : 2025-07-04 DOI:10.3390/metabo15070449
Chongyuan Sima, Qifan Zhang, Xiaoli Yu, Bo Yan, Shulin Zhang
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引用次数: 0

摘要

目的:为探讨斑马鱼感染海洋分枝杆菌后的代谢变化,本研究采用广泛靶向的代谢组学方法,分析斑马鱼感染5天后的整体代谢谱变化。方法:采用液相色谱-串联质谱法(LC-MS/MS)采集数据。质谱数据采用Analyst 1.6.3和MultiQuant 3.0.3软件进行处理,并进行多元统计分析。利用KEGG数据库、HMDB数据库和CHEBI数据库筛选鉴定差异代谢物,并通过KEGG途径进行代谢途径富集分析。结果:共检测到329种代谢物,筛选出61种差异代谢物。其中,犬尿氨酸、异allo胆酸、2′-脱氧鸟苷、吲哚-3-甲醛、l-乳酸等41种代谢物下调,l-棕榈酰基肉碱、肉豆蔻酰基左旋肉碱、十二烷基肉碱、2-异丙基苹果酸、2-甲基琥珀酸等20种代谢物上调。KEGG代谢途径富集分析表明,这些差异代谢物主要参与嘧啶代谢、核苷酸代谢、戊糖磷酸代谢和嘌呤代谢等代谢途径。结论:本研究表明斑马鱼幼虫感染海芽胞杆菌后,多种代谢物和代谢途径发生了显著变化。研究结果提高了对斑马鱼作为分枝杆菌研究领域模式生物的认识,为后续利用斑马鱼进行代谢组学相关研究奠定了坚实的基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Metabolic Changes in Zebrafish Larvae Infected with Mycobacterium marinum: A Widely Targeted Metabolomic Analysis.

Objectives: To explore the metabolic changes in zebrafish larvae after infection with Mycobacterium marinum, this study adopted a widely targeted metabolomic approach to analyze the changes in the overall metabolic profiles of zebrafish larvae infected for 5 days.

Methods: Data were collected by liquid chromatography-tandem mass spectrometry (LC-MS/MS). Mass spectrometry data were processed using Analyst 1.6.3 and MultiQuant 3.0.3 software, and multivariate statistical analysis was carried out. The KEGG database, HMDB database, and CHEBI database were used to screen and identify differential metabolites, and metabolic pathway enrichment analysis was performed through KEGG pathways.

Results: A total of 329 metabolites were detected, among which 61 differential metabolites were screened. Specifically, 41 metabolites, such as kynurenine, isoallolithocholic acid, 2'-deoxyguanosine, indole-3-carboxaldehyde, and L-lactic acid, were downregulated, while 20 metabolites, such as L-palmitoylcarnitine, myristoyl-L-carnitine, dodecanoylcarnitine, 2-isopropyl-malic acid, and 2-methylsuccinic acid, were upregulated. KEGG metabolic pathway enrichment analysis indicated that these differential metabolites were mainly involved in metabolic pathways such as pyrimidine metabolism, nucleotide metabolism, the pentose phosphate pathway, and purine metabolism.

Conclusions: This study demonstrated that significant changes occurred in multiple metabolites and metabolic pathways in zebrafish larvae after infection with M. marinum. The research results have improved the understanding of zebrafish as a model organism in the field of Mycobacterium research and laid a solid foundation for subsequent metabolomic-related research using zebrafish.

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来源期刊
Metabolites
Metabolites Biochemistry, Genetics and Molecular Biology-Molecular Biology
CiteScore
5.70
自引率
7.30%
发文量
1070
审稿时长
17.17 days
期刊介绍: Metabolites (ISSN 2218-1989) is an international, peer-reviewed open access journal of metabolism and metabolomics. Metabolites publishes original research articles and review articles in all molecular aspects of metabolism relevant to the fields of metabolomics, metabolic biochemistry, computational and systems biology, biotechnology and medicine, with a particular focus on the biological roles of metabolites and small molecule biomarkers. Metabolites encourages scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on article length. Sufficient experimental details must be provided to enable the results to be accurately reproduced. Electronic material representing additional figures, materials and methods explanation, or supporting results and evidence can be submitted with the main manuscript as supplementary material.
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