Richard Mayne, Peter Simmonds, Donald B Smith, Evelien M Adriaenssens, Elliot J Lefkowitz, Hanna M Oksanen, Francisco Murilo Zerbini, Poliane Alfenas-Zerbini, Frank O Aylward, Juliana Freitas-Astúa, R Curtis Hendrickson, Holly R Hughes, Mart Krupovic, Jens H Kuhn, Małgorzata Łobocka, Arcady R Mushegian, Judit Penzes, Alejandro Reyes Muñoz, David L Robertson, Simon Roux, Luisa Rubino, Sead Sabanadzovic, Nobuhiro Suzuki, Dann Turner, Koenraad Van Doorslaer, Arvind Varsani
{"title":"病毒分类学建议摘要:传播病毒分类学进展的可搜索和可引用资源。","authors":"Richard Mayne, Peter Simmonds, Donald B Smith, Evelien M Adriaenssens, Elliot J Lefkowitz, Hanna M Oksanen, Francisco Murilo Zerbini, Poliane Alfenas-Zerbini, Frank O Aylward, Juliana Freitas-Astúa, R Curtis Hendrickson, Holly R Hughes, Mart Krupovic, Jens H Kuhn, Małgorzata Łobocka, Arcady R Mushegian, Judit Penzes, Alejandro Reyes Muñoz, David L Robertson, Simon Roux, Luisa Rubino, Sead Sabanadzovic, Nobuhiro Suzuki, Dann Turner, Koenraad Van Doorslaer, Arvind Varsani","doi":"10.1099/jgv.0.002079","DOIUrl":null,"url":null,"abstract":"<p><p>Taxonomic classification of cellular organisms requires the publication of descriptions and proposed names of species and the deposition of specimens. Virus taxonomy is developed through a different system of annual submission of formal taxonomy proposals (TPs) that can be submitted by anyone but are typically prepared by a study group appointed by the International Committee on Taxonomy of Viruses (ICTV) and consisting of experts on a particular group of viruses. These are initially evaluated by an expert subcommittee and by the executive committee (EC) of the ICTV. EC-approved TPs are then submitted for evaluation and a ratification vote by the wider ICTV membership. Following ratification, the new taxonomy is annually updated in the Master Species List, associated databases and bioinformatic resources. The process is consistent, creates traceability in assignments and supports a fully evaluated, hierarchical classification and nomenclature of all taxonomic ranks from species to realms. The structure also facilitates large-scale and coordinated changes to virus taxonomy, such as the recent introduction of a binomial species nomenclature.TPs are available on the ICTV website after ratification, but they are not indexed in bibliographic databases and are not easily cited. Authors of TPs do not receive citation credit for adopted proposals, and their voluntary contributions are largely invisible in the published literature. For greater visibility of TPs and their authors, the ICTV will commence the annual publication of summaries of all TPs from each ICTV subcommittee. These summaries will provide a searchable compendium of all annual taxonomy changes and additions as well as direct links to the Master Species List and other ICTV bioinformatic resources. Their publication will provide due credit and citations for their authors, form the basis for disseminating taxonomy decisions and promote greater visibility and accessibility to taxonomy changes for the virology community.</p>","PeriodicalId":15880,"journal":{"name":"Journal of General Virology","volume":"106 7","pages":""},"PeriodicalIF":4.3000,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12451635/pdf/","citationCount":"0","resultStr":"{\"title\":\"Virus taxonomy proposal summaries: a searchable and citable resource to disseminate virus taxonomy advances.\",\"authors\":\"Richard Mayne, Peter Simmonds, Donald B Smith, Evelien M Adriaenssens, Elliot J Lefkowitz, Hanna M Oksanen, Francisco Murilo Zerbini, Poliane Alfenas-Zerbini, Frank O Aylward, Juliana Freitas-Astúa, R Curtis Hendrickson, Holly R Hughes, Mart Krupovic, Jens H Kuhn, Małgorzata Łobocka, Arcady R Mushegian, Judit Penzes, Alejandro Reyes Muñoz, David L Robertson, Simon Roux, Luisa Rubino, Sead Sabanadzovic, Nobuhiro Suzuki, Dann Turner, Koenraad Van Doorslaer, Arvind Varsani\",\"doi\":\"10.1099/jgv.0.002079\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Taxonomic classification of cellular organisms requires the publication of descriptions and proposed names of species and the deposition of specimens. 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Virus taxonomy proposal summaries: a searchable and citable resource to disseminate virus taxonomy advances.
Taxonomic classification of cellular organisms requires the publication of descriptions and proposed names of species and the deposition of specimens. Virus taxonomy is developed through a different system of annual submission of formal taxonomy proposals (TPs) that can be submitted by anyone but are typically prepared by a study group appointed by the International Committee on Taxonomy of Viruses (ICTV) and consisting of experts on a particular group of viruses. These are initially evaluated by an expert subcommittee and by the executive committee (EC) of the ICTV. EC-approved TPs are then submitted for evaluation and a ratification vote by the wider ICTV membership. Following ratification, the new taxonomy is annually updated in the Master Species List, associated databases and bioinformatic resources. The process is consistent, creates traceability in assignments and supports a fully evaluated, hierarchical classification and nomenclature of all taxonomic ranks from species to realms. The structure also facilitates large-scale and coordinated changes to virus taxonomy, such as the recent introduction of a binomial species nomenclature.TPs are available on the ICTV website after ratification, but they are not indexed in bibliographic databases and are not easily cited. Authors of TPs do not receive citation credit for adopted proposals, and their voluntary contributions are largely invisible in the published literature. For greater visibility of TPs and their authors, the ICTV will commence the annual publication of summaries of all TPs from each ICTV subcommittee. These summaries will provide a searchable compendium of all annual taxonomy changes and additions as well as direct links to the Master Species List and other ICTV bioinformatic resources. Their publication will provide due credit and citations for their authors, form the basis for disseminating taxonomy decisions and promote greater visibility and accessibility to taxonomy changes for the virology community.
期刊介绍:
JOURNAL OF GENERAL VIROLOGY (JGV), a journal of the Society for General Microbiology (SGM), publishes high-calibre research papers with high production standards, giving the journal a worldwide reputation for excellence and attracting an eminent audience.