Katherine Duchesneau, Borja Aldeguer-Riquelme, Caitlin Petro, Ghiwa Makke, Madison Green, Malak Tfaily, Rachel Wilson, Spencer W. Roth, Eric R. Johnston, Laurel A. Kluber, Christopher W. Schadt, Jesse B. Trejo, Stephen J. Callister, Samuel O. Purvine, Jeffrey P. Chanton, Paul J. Hanson, Susannah Tringe, Emiley Eloe-Fadrosh, Tijana Glavina del Rio, Konstantinos T. Konstantinidis, Joel E. Kostka
{"title":"北方泥炭地微生物群落表现出对变暖的抗性,并从土壤有机质中获取电子受体","authors":"Katherine Duchesneau, Borja Aldeguer-Riquelme, Caitlin Petro, Ghiwa Makke, Madison Green, Malak Tfaily, Rachel Wilson, Spencer W. Roth, Eric R. Johnston, Laurel A. Kluber, Christopher W. Schadt, Jesse B. Trejo, Stephen J. Callister, Samuel O. Purvine, Jeffrey P. Chanton, Paul J. Hanson, Susannah Tringe, Emiley Eloe-Fadrosh, Tijana Glavina del Rio, Konstantinos T. Konstantinidis, Joel E. Kostka","doi":"10.1038/s41467-025-61664-7","DOIUrl":null,"url":null,"abstract":"<p>The response of microbial communities that regulate belowground carbon turnover to climate change drivers in peatlands is poorly understood. Here, we leverage a whole ecosystem warming experiment to elucidate the key processes of terminal carbon decomposition and community responses to temperature rise. Our dataset of 697 metagenome-assembled genomes (MAGs) represents the microbial community from the surface (10 cm) to 2 m deep into the peat column, with only 3.7% of genomes overlapping with other well-studied peatlands. Community composition has yet to show a significant response to warming after 3 years, suggesting that metabolically diverse soil microbial communities are resistant to climate change. Surprisingly, abundant and active methanogens in the genus <i>Candidatus</i> Methanoflorens, <i>Methanobacterium</i>, and <i>Methanoregula</i> show the potential for both acetoclastic and hydrogenotrophic methanogenesis. Nonetheless, the predominant pathways for anaerobic carbon decomposition include sulfate/sulfite reduction, denitrification, and acetogenesis, rather than methanogenesis based on gene abundances. Multi-omics data suggest that organic matter cleavage provides terminal electron acceptors, which together with methanogen metabolic flexibility, may explain peat microbiome composition resistance to warming.</p>","PeriodicalId":19066,"journal":{"name":"Nature Communications","volume":"278 1","pages":""},"PeriodicalIF":15.7000,"publicationDate":"2025-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter\",\"authors\":\"Katherine Duchesneau, Borja Aldeguer-Riquelme, Caitlin Petro, Ghiwa Makke, Madison Green, Malak Tfaily, Rachel Wilson, Spencer W. Roth, Eric R. Johnston, Laurel A. Kluber, Christopher W. Schadt, Jesse B. Trejo, Stephen J. Callister, Samuel O. Purvine, Jeffrey P. Chanton, Paul J. Hanson, Susannah Tringe, Emiley Eloe-Fadrosh, Tijana Glavina del Rio, Konstantinos T. Konstantinidis, Joel E. Kostka\",\"doi\":\"10.1038/s41467-025-61664-7\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>The response of microbial communities that regulate belowground carbon turnover to climate change drivers in peatlands is poorly understood. Here, we leverage a whole ecosystem warming experiment to elucidate the key processes of terminal carbon decomposition and community responses to temperature rise. Our dataset of 697 metagenome-assembled genomes (MAGs) represents the microbial community from the surface (10 cm) to 2 m deep into the peat column, with only 3.7% of genomes overlapping with other well-studied peatlands. Community composition has yet to show a significant response to warming after 3 years, suggesting that metabolically diverse soil microbial communities are resistant to climate change. Surprisingly, abundant and active methanogens in the genus <i>Candidatus</i> Methanoflorens, <i>Methanobacterium</i>, and <i>Methanoregula</i> show the potential for both acetoclastic and hydrogenotrophic methanogenesis. Nonetheless, the predominant pathways for anaerobic carbon decomposition include sulfate/sulfite reduction, denitrification, and acetogenesis, rather than methanogenesis based on gene abundances. Multi-omics data suggest that organic matter cleavage provides terminal electron acceptors, which together with methanogen metabolic flexibility, may explain peat microbiome composition resistance to warming.</p>\",\"PeriodicalId\":19066,\"journal\":{\"name\":\"Nature Communications\",\"volume\":\"278 1\",\"pages\":\"\"},\"PeriodicalIF\":15.7000,\"publicationDate\":\"2025-07-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Nature Communications\",\"FirstCategoryId\":\"103\",\"ListUrlMain\":\"https://doi.org/10.1038/s41467-025-61664-7\",\"RegionNum\":1,\"RegionCategory\":\"综合性期刊\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MULTIDISCIPLINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Nature Communications","FirstCategoryId":"103","ListUrlMain":"https://doi.org/10.1038/s41467-025-61664-7","RegionNum":1,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter
The response of microbial communities that regulate belowground carbon turnover to climate change drivers in peatlands is poorly understood. Here, we leverage a whole ecosystem warming experiment to elucidate the key processes of terminal carbon decomposition and community responses to temperature rise. Our dataset of 697 metagenome-assembled genomes (MAGs) represents the microbial community from the surface (10 cm) to 2 m deep into the peat column, with only 3.7% of genomes overlapping with other well-studied peatlands. Community composition has yet to show a significant response to warming after 3 years, suggesting that metabolically diverse soil microbial communities are resistant to climate change. Surprisingly, abundant and active methanogens in the genus Candidatus Methanoflorens, Methanobacterium, and Methanoregula show the potential for both acetoclastic and hydrogenotrophic methanogenesis. Nonetheless, the predominant pathways for anaerobic carbon decomposition include sulfate/sulfite reduction, denitrification, and acetogenesis, rather than methanogenesis based on gene abundances. Multi-omics data suggest that organic matter cleavage provides terminal electron acceptors, which together with methanogen metabolic flexibility, may explain peat microbiome composition resistance to warming.
期刊介绍:
Nature Communications, an open-access journal, publishes high-quality research spanning all areas of the natural sciences. Papers featured in the journal showcase significant advances relevant to specialists in each respective field. With a 2-year impact factor of 16.6 (2022) and a median time of 8 days from submission to the first editorial decision, Nature Communications is committed to rapid dissemination of research findings. As a multidisciplinary journal, it welcomes contributions from biological, health, physical, chemical, Earth, social, mathematical, applied, and engineering sciences, aiming to highlight important breakthroughs within each domain.