Jie Fang, Yongcui Deng, Zihao Liu, Jonathan M. Adams
{"title":"万物无处不在吗?扩散限制对甲烷化菌群落功能的影响","authors":"Jie Fang, Yongcui Deng, Zihao Liu, Jonathan M. Adams","doi":"10.1111/1462-2920.70158","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>The significance of dispersal limitation in microbial ecology and biogeography remains debated. We aimed to clarify the role of dispersal limitation in the adaptation of methanotroph communities to salt-stress, essentially testing the ‘everything is everywhere’ hypothesis in functional terms. Riparian sediments along the Yangtze River and lakeshore sediments at varying geographical distances inland from the river were collected. Microcosms were incubated with ~5% CH<sub>4</sub> under three conditions: 50 g/L salinity, 50 g/L salinity plus a methanotroph community inoculum, and a control. We observed a significant delay in methane oxidation at increased salinity, but salt-tolerant methanotrophic activity persisted in riparian sediments. Using DNA-SIP, we identified halotolerant <i>Methylobacter</i>-taxa that possibly dispersed from the saline estuary. By contrast, in lakes/ponds inland away from the Yangtze, progressively fewer samples oxidised methane under high salinity without inoculation, until at 130 km distance, no samples could adapt. Methanotrophy was restored in every case by inoculation with propagules from the saline Yangtze Delta, confirming the impact of dispersal limitation of halotolerant <i>Methylobacter</i>-propagules in constraining ecosystem functional adaptation. By focusing on ecosystem functions rather than just taxonomic communities, this study uniquely tests a key paradigm in microbial ecology, suggesting that broad-scale microbial dispersal limitation can constrain ecosystem adaptation.</p>\n </div>","PeriodicalId":11898,"journal":{"name":"Environmental microbiology","volume":"27 7","pages":""},"PeriodicalIF":4.0000,"publicationDate":"2025-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Is Everything Everywhere? Dispersal Limitation Impacts Methanotroph Community Functioning\",\"authors\":\"Jie Fang, Yongcui Deng, Zihao Liu, Jonathan M. Adams\",\"doi\":\"10.1111/1462-2920.70158\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n <p>The significance of dispersal limitation in microbial ecology and biogeography remains debated. We aimed to clarify the role of dispersal limitation in the adaptation of methanotroph communities to salt-stress, essentially testing the ‘everything is everywhere’ hypothesis in functional terms. Riparian sediments along the Yangtze River and lakeshore sediments at varying geographical distances inland from the river were collected. Microcosms were incubated with ~5% CH<sub>4</sub> under three conditions: 50 g/L salinity, 50 g/L salinity plus a methanotroph community inoculum, and a control. We observed a significant delay in methane oxidation at increased salinity, but salt-tolerant methanotrophic activity persisted in riparian sediments. Using DNA-SIP, we identified halotolerant <i>Methylobacter</i>-taxa that possibly dispersed from the saline estuary. By contrast, in lakes/ponds inland away from the Yangtze, progressively fewer samples oxidised methane under high salinity without inoculation, until at 130 km distance, no samples could adapt. Methanotrophy was restored in every case by inoculation with propagules from the saline Yangtze Delta, confirming the impact of dispersal limitation of halotolerant <i>Methylobacter</i>-propagules in constraining ecosystem functional adaptation. By focusing on ecosystem functions rather than just taxonomic communities, this study uniquely tests a key paradigm in microbial ecology, suggesting that broad-scale microbial dispersal limitation can constrain ecosystem adaptation.</p>\\n </div>\",\"PeriodicalId\":11898,\"journal\":{\"name\":\"Environmental microbiology\",\"volume\":\"27 7\",\"pages\":\"\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2025-07-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Environmental microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/1462-2920.70158\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Environmental microbiology","FirstCategoryId":"99","ListUrlMain":"https://enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/1462-2920.70158","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Is Everything Everywhere? Dispersal Limitation Impacts Methanotroph Community Functioning
The significance of dispersal limitation in microbial ecology and biogeography remains debated. We aimed to clarify the role of dispersal limitation in the adaptation of methanotroph communities to salt-stress, essentially testing the ‘everything is everywhere’ hypothesis in functional terms. Riparian sediments along the Yangtze River and lakeshore sediments at varying geographical distances inland from the river were collected. Microcosms were incubated with ~5% CH4 under three conditions: 50 g/L salinity, 50 g/L salinity plus a methanotroph community inoculum, and a control. We observed a significant delay in methane oxidation at increased salinity, but salt-tolerant methanotrophic activity persisted in riparian sediments. Using DNA-SIP, we identified halotolerant Methylobacter-taxa that possibly dispersed from the saline estuary. By contrast, in lakes/ponds inland away from the Yangtze, progressively fewer samples oxidised methane under high salinity without inoculation, until at 130 km distance, no samples could adapt. Methanotrophy was restored in every case by inoculation with propagules from the saline Yangtze Delta, confirming the impact of dispersal limitation of halotolerant Methylobacter-propagules in constraining ecosystem functional adaptation. By focusing on ecosystem functions rather than just taxonomic communities, this study uniquely tests a key paradigm in microbial ecology, suggesting that broad-scale microbial dispersal limitation can constrain ecosystem adaptation.
期刊介绍:
Environmental Microbiology provides a high profile vehicle for publication of the most innovative, original and rigorous research in the field. The scope of the Journal encompasses the diversity of current research on microbial processes in the environment, microbial communities, interactions and evolution and includes, but is not limited to, the following:
the structure, activities and communal behaviour of microbial communities
microbial community genetics and evolutionary processes
microbial symbioses, microbial interactions and interactions with plants, animals and abiotic factors
microbes in the tree of life, microbial diversification and evolution
population biology and clonal structure
microbial metabolic and structural diversity
microbial physiology, growth and survival
microbes and surfaces, adhesion and biofouling
responses to environmental signals and stress factors
modelling and theory development
pollution microbiology
extremophiles and life in extreme and unusual little-explored habitats
element cycles and biogeochemical processes, primary and secondary production
microbes in a changing world, microbially-influenced global changes
evolution and diversity of archaeal and bacterial viruses
new technological developments in microbial ecology and evolution, in particular for the study of activities of microbial communities, non-culturable microorganisms and emerging pathogens