Tao Zhang, Yue Yang, Xin Li, Fabao Zhao, Zongji Zhuo, Le Wang, Wenbo Zhang, Erik De Clercq, Christophe Pannecouque*, Peng Zhan*, Dongwei Kang* and Xinyong Liu*,
{"title":"探测疏水通道内的优势基序产生含恶二唑的二芳基嘧啶衍生物作为有效的HIV-1非核苷类逆转录酶抑制剂。","authors":"Tao Zhang, Yue Yang, Xin Li, Fabao Zhao, Zongji Zhuo, Le Wang, Wenbo Zhang, Erik De Clercq, Christophe Pannecouque*, Peng Zhan*, Dongwei Kang* and Xinyong Liu*, ","doi":"10.1021/acs.jmedchem.5c01102","DOIUrl":null,"url":null,"abstract":"<p >To develop effective non-nucleoside reverse transcriptase inhibitors (NNRTIs) with improved antidrug resistance profiles and drug-like properties, a series of novel diarylpyrimidine derivatives targeting the hydrophobic domain of the NNRTI-binding pocket was strategically designed, synthesized, and evaluated. Following structural optimization, <b>18e</b> (EC<sub>50</sub> = 5.06–54.0 nM) emerged as the most potent inhibitor against wild-type and NNRTI-resistant strains, comparable to ETR (EC<sub>50</sub> = 3.79–51.8 nM). In particular, for Y188L and RES056 mutant strains, <b>18e</b> (EC<sub>50(Y188L)</sub> = 24.2 nM, RF = 4.79/EC<sub>50(RES056)</sub> = 54.0 nM, RF = 10.7) showed improved antiresistance profiles versus ETR (EC<sub>50(Y188L)</sub> = 23.4 nM, RF = 6.18/EC<sub>50(RES056)</sub> = 51.8 nM, RF = 13.7). Molecular simulation studies indicated that the 1,3,4-oxadiazolylpyridine motif was essential for binding to reverse transcriptase. Moreover, <b>18e</b> exhibited promising pharmacokinetic properties (<i>T</i><sub>1/2</sub> = 2.35 h, <i>F</i> = 14.4%) and safety (LD<sub>50</sub> < 2000 mg/kg), positioning it as a promising anti-HIV-1 drug candidate.</p>","PeriodicalId":46,"journal":{"name":"Journal of Medicinal Chemistry","volume":"68 15","pages":"16197–16211"},"PeriodicalIF":6.8000,"publicationDate":"2025-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Probing the Dominant Motifs within the Hydrophobic Channel Yields Oxadiazole-Containing Diarylpyrimidine Derivatives as Potent HIV-1 Non-Nucleoside Reverse Transcriptase Inhibitors\",\"authors\":\"Tao Zhang, Yue Yang, Xin Li, Fabao Zhao, Zongji Zhuo, Le Wang, Wenbo Zhang, Erik De Clercq, Christophe Pannecouque*, Peng Zhan*, Dongwei Kang* and Xinyong Liu*, \",\"doi\":\"10.1021/acs.jmedchem.5c01102\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >To develop effective non-nucleoside reverse transcriptase inhibitors (NNRTIs) with improved antidrug resistance profiles and drug-like properties, a series of novel diarylpyrimidine derivatives targeting the hydrophobic domain of the NNRTI-binding pocket was strategically designed, synthesized, and evaluated. Following structural optimization, <b>18e</b> (EC<sub>50</sub> = 5.06–54.0 nM) emerged as the most potent inhibitor against wild-type and NNRTI-resistant strains, comparable to ETR (EC<sub>50</sub> = 3.79–51.8 nM). In particular, for Y188L and RES056 mutant strains, <b>18e</b> (EC<sub>50(Y188L)</sub> = 24.2 nM, RF = 4.79/EC<sub>50(RES056)</sub> = 54.0 nM, RF = 10.7) showed improved antiresistance profiles versus ETR (EC<sub>50(Y188L)</sub> = 23.4 nM, RF = 6.18/EC<sub>50(RES056)</sub> = 51.8 nM, RF = 13.7). Molecular simulation studies indicated that the 1,3,4-oxadiazolylpyridine motif was essential for binding to reverse transcriptase. Moreover, <b>18e</b> exhibited promising pharmacokinetic properties (<i>T</i><sub>1/2</sub> = 2.35 h, <i>F</i> = 14.4%) and safety (LD<sub>50</sub> < 2000 mg/kg), positioning it as a promising anti-HIV-1 drug candidate.</p>\",\"PeriodicalId\":46,\"journal\":{\"name\":\"Journal of Medicinal Chemistry\",\"volume\":\"68 15\",\"pages\":\"16197–16211\"},\"PeriodicalIF\":6.8000,\"publicationDate\":\"2025-07-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Medicinal Chemistry\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://pubs.acs.org/doi/10.1021/acs.jmedchem.5c01102\",\"RegionNum\":1,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Medicinal Chemistry","FirstCategoryId":"3","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acs.jmedchem.5c01102","RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
Probing the Dominant Motifs within the Hydrophobic Channel Yields Oxadiazole-Containing Diarylpyrimidine Derivatives as Potent HIV-1 Non-Nucleoside Reverse Transcriptase Inhibitors
To develop effective non-nucleoside reverse transcriptase inhibitors (NNRTIs) with improved antidrug resistance profiles and drug-like properties, a series of novel diarylpyrimidine derivatives targeting the hydrophobic domain of the NNRTI-binding pocket was strategically designed, synthesized, and evaluated. Following structural optimization, 18e (EC50 = 5.06–54.0 nM) emerged as the most potent inhibitor against wild-type and NNRTI-resistant strains, comparable to ETR (EC50 = 3.79–51.8 nM). In particular, for Y188L and RES056 mutant strains, 18e (EC50(Y188L) = 24.2 nM, RF = 4.79/EC50(RES056) = 54.0 nM, RF = 10.7) showed improved antiresistance profiles versus ETR (EC50(Y188L) = 23.4 nM, RF = 6.18/EC50(RES056) = 51.8 nM, RF = 13.7). Molecular simulation studies indicated that the 1,3,4-oxadiazolylpyridine motif was essential for binding to reverse transcriptase. Moreover, 18e exhibited promising pharmacokinetic properties (T1/2 = 2.35 h, F = 14.4%) and safety (LD50 < 2000 mg/kg), positioning it as a promising anti-HIV-1 drug candidate.
期刊介绍:
The Journal of Medicinal Chemistry is a prestigious biweekly peer-reviewed publication that focuses on the multifaceted field of medicinal chemistry. Since its inception in 1959 as the Journal of Medicinal and Pharmaceutical Chemistry, it has evolved to become a cornerstone in the dissemination of research findings related to the design, synthesis, and development of therapeutic agents.
The Journal of Medicinal Chemistry is recognized for its significant impact in the scientific community, as evidenced by its 2022 impact factor of 7.3. This metric reflects the journal's influence and the importance of its content in shaping the future of drug discovery and development. The journal serves as a vital resource for chemists, pharmacologists, and other researchers interested in the molecular mechanisms of drug action and the optimization of therapeutic compounds.