Kaijuan Wang , Ruichen Liu , Li Li , Xuejing Duan , Xianglong Zhao , Hongying Cong , Xiaojing Gao , Kunlun Yin , Zhangwei Gao , Zhou Zhou
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This study aims to establish a novel typing method based on targeted semi-quantitative proteomics to address the shortcomings of existing methods.</div></div><div><h3>Results</h3><div>Formalin-fixed, paraffin-embedded (FFPE) myocardial tissue samples from 52 CA and 52 hypertrophic cardiomyopathy (HCM) patients were analyzed. A semi-quantitative typing method was developed using triple quadrupole mass spectrometry, with laser microdissection mass spectrometry (LMD-MS) serving as the reference standard.</div><div>A total of 52 peptides were analyzed. Key amyloid-associated proteins (AAPs) —apolipoprotein A-IV (apo A-IV), apolipoprotein E (apo E), and serum amyloid P component (SAP) — showed high diagnostic accuracy, with AUC values of 0.964, 0.999, and 0.923, respectively. Transthyretin (TTR), immunoglobulin light chains- κ (IGL - κ), and IGL-λ were semi-quantified using normalized scores (NS) adjusted for microdissection and peptide peak areas. An NS<sub>TTR</sub> cutoff of 0.066 distinguished transthyretin amyloidosis (ATTR), while NS<sub>λ</sub>-NS<sub>κ</sub> differentiated AL-κ (≤-0.04758) from AL-λ (>0.00999). The method successfully identified 15 ATTR, 10 AL-κ, 21 AL-λ, and mixed subtypes, aligning with LMD-MS results. By contrast, immunohistochemistry accurately typed only 14 cases, with most results inconclusive.</div></div><div><h3>Significance</h3><div>This targeted semi-quantitative mass spectrometry method has high consistency with non-targeted LMD-MS typing, with an accuracy higher than IHC (100 % vs. 30.8 %), while compensating for the shortcomings of non-targeted proteomics. It provides a practical method for CA typing in routine clinical laboratories and may help identify rare subtypes of amyloidosis in the future.</div></div>","PeriodicalId":240,"journal":{"name":"Analytica Chimica Acta","volume":"1372 ","pages":"Article 344453"},"PeriodicalIF":6.0000,"publicationDate":"2025-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Development of a novel targeted LC-MS/MS methods for the typing of cardiac amyloidosis\",\"authors\":\"Kaijuan Wang , Ruichen Liu , Li Li , Xuejing Duan , Xianglong Zhao , Hongying Cong , Xiaojing Gao , Kunlun Yin , Zhangwei Gao , Zhou Zhou\",\"doi\":\"10.1016/j.aca.2025.344453\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background</h3><div>The treatment and prognosis of cardiac amyloidosis (CA) depend heavily on the accurate identification of amyloid protein types. Histopathological methods are the most commonly used approach, but often produce inconclusive results. The application of mass spectrometry with laser microdissection mass spectrometry based on non-targeted proteomics in CA diagnosis is gradually being recognized, but it is expensive, time-consuming, and still in the early stages of scientific research applications. This study aims to establish a novel typing method based on targeted semi-quantitative proteomics to address the shortcomings of existing methods.</div></div><div><h3>Results</h3><div>Formalin-fixed, paraffin-embedded (FFPE) myocardial tissue samples from 52 CA and 52 hypertrophic cardiomyopathy (HCM) patients were analyzed. A semi-quantitative typing method was developed using triple quadrupole mass spectrometry, with laser microdissection mass spectrometry (LMD-MS) serving as the reference standard.</div><div>A total of 52 peptides were analyzed. Key amyloid-associated proteins (AAPs) —apolipoprotein A-IV (apo A-IV), apolipoprotein E (apo E), and serum amyloid P component (SAP) — showed high diagnostic accuracy, with AUC values of 0.964, 0.999, and 0.923, respectively. Transthyretin (TTR), immunoglobulin light chains- κ (IGL - κ), and IGL-λ were semi-quantified using normalized scores (NS) adjusted for microdissection and peptide peak areas. An NS<sub>TTR</sub> cutoff of 0.066 distinguished transthyretin amyloidosis (ATTR), while NS<sub>λ</sub>-NS<sub>κ</sub> differentiated AL-κ (≤-0.04758) from AL-λ (>0.00999). The method successfully identified 15 ATTR, 10 AL-κ, 21 AL-λ, and mixed subtypes, aligning with LMD-MS results. By contrast, immunohistochemistry accurately typed only 14 cases, with most results inconclusive.</div></div><div><h3>Significance</h3><div>This targeted semi-quantitative mass spectrometry method has high consistency with non-targeted LMD-MS typing, with an accuracy higher than IHC (100 % vs. 30.8 %), while compensating for the shortcomings of non-targeted proteomics. 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Development of a novel targeted LC-MS/MS methods for the typing of cardiac amyloidosis
Background
The treatment and prognosis of cardiac amyloidosis (CA) depend heavily on the accurate identification of amyloid protein types. Histopathological methods are the most commonly used approach, but often produce inconclusive results. The application of mass spectrometry with laser microdissection mass spectrometry based on non-targeted proteomics in CA diagnosis is gradually being recognized, but it is expensive, time-consuming, and still in the early stages of scientific research applications. This study aims to establish a novel typing method based on targeted semi-quantitative proteomics to address the shortcomings of existing methods.
Results
Formalin-fixed, paraffin-embedded (FFPE) myocardial tissue samples from 52 CA and 52 hypertrophic cardiomyopathy (HCM) patients were analyzed. A semi-quantitative typing method was developed using triple quadrupole mass spectrometry, with laser microdissection mass spectrometry (LMD-MS) serving as the reference standard.
A total of 52 peptides were analyzed. Key amyloid-associated proteins (AAPs) —apolipoprotein A-IV (apo A-IV), apolipoprotein E (apo E), and serum amyloid P component (SAP) — showed high diagnostic accuracy, with AUC values of 0.964, 0.999, and 0.923, respectively. Transthyretin (TTR), immunoglobulin light chains- κ (IGL - κ), and IGL-λ were semi-quantified using normalized scores (NS) adjusted for microdissection and peptide peak areas. An NSTTR cutoff of 0.066 distinguished transthyretin amyloidosis (ATTR), while NSλ-NSκ differentiated AL-κ (≤-0.04758) from AL-λ (>0.00999). The method successfully identified 15 ATTR, 10 AL-κ, 21 AL-λ, and mixed subtypes, aligning with LMD-MS results. By contrast, immunohistochemistry accurately typed only 14 cases, with most results inconclusive.
Significance
This targeted semi-quantitative mass spectrometry method has high consistency with non-targeted LMD-MS typing, with an accuracy higher than IHC (100 % vs. 30.8 %), while compensating for the shortcomings of non-targeted proteomics. It provides a practical method for CA typing in routine clinical laboratories and may help identify rare subtypes of amyloidosis in the future.
期刊介绍:
Analytica Chimica Acta has an open access mirror journal Analytica Chimica Acta: X, sharing the same aims and scope, editorial team, submission system and rigorous peer review.
Analytica Chimica Acta provides a forum for the rapid publication of original research, and critical, comprehensive reviews dealing with all aspects of fundamental and applied modern analytical chemistry. The journal welcomes the submission of research papers which report studies concerning the development of new and significant analytical methodologies. In determining the suitability of submitted articles for publication, particular scrutiny will be placed on the degree of novelty and impact of the research and the extent to which it adds to the existing body of knowledge in analytical chemistry.