酿酒葡萄球菌和pastorianus葡萄球菌响应质膜胁迫的时间分辨转录组学。

IF 6.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Yuta Yamazaki, Fumihiko Omura, Eiichiro Ono, Nozomu Kamada, Keiko Kono
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引用次数: 0

摘要

酵母是对人类社会有益的微生物,在学术和工业上都有广泛的应用。出于学术目的,酿酒葡萄球菌是研究真核细胞过程的良好模型。在工业用途上,具有酿酒酵母和真贝酵母杂交基因组的pastorianus已被用于生产窖藏啤酒。在发酵过程中,酵母产生约7%的EtOH,诱导酵母质膜/细胞壁应激。因此,酵母在发酵过程中可能经历了PM胁迫,适应了自形成的环境。然而,酵母如何适应PM压力仍不清楚。在这里,我们通过时间分辨mRNA-seq分析研究了酿酒葡萄球菌和帕斯多利葡萄球菌在适应PM胁迫过程中的时间细胞反应。我们的数据显示酿酒葡萄球菌和pastorianus葡萄球菌在适应过程中的转录表型不同。结果可能反映了在不同营养环境中进化的两种酵母的不同性质。本文提出的数据集将为研究这些不同驯化酵母在PM胁迫下的特征性质提供有希望的资源。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Time-resolved transcriptomics of S. cerevisiae and S. pastorianus in response to plasma membrane stresses.

Time-resolved transcriptomics of S. cerevisiae and S. pastorianus in response to plasma membrane stresses.

Time-resolved transcriptomics of S. cerevisiae and S. pastorianus in response to plasma membrane stresses.

Time-resolved transcriptomics of S. cerevisiae and S. pastorianus in response to plasma membrane stresses.

Yeasts are beneficial microorganisms for human society and are utilized for academic and industrial purposes. For academic purposes, S. cerevisiae is a well-investigated model for studying eukaryotic cellular processes. For industrial purposes, S. pastorianus, which has a hybrid genome of S. cerevisiae and S. eubayanus, has been served for lager beer production. During fermentation, S. pastorianus produces ~7% of EtOH, which induces plasma membrane (PM)/cell wall stress in yeast. Therefore, S. pastorianus may experience PM stress and adapt to the self-forming environment during fermentation. However, how yeast adapts to PM stress remains unclear. Here, we investigated the temporal cellular responses of S. cerevisiae and S. pastorianus during adaptation to PM stresses by time-resolved mRNA-seq analysis. Our data showed different transcriptional phenotypes between S. cerevisiae and S. pastorianus during adaptation. The results may reflect the distinct nature of the two yeasts that have evolved in different nutritional environments. The dataset presented here would provide a promising resource for studying the characteristic nature of these differentially domesticated yeasts upon PM stresses.

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来源期刊
Scientific Data
Scientific Data Social Sciences-Education
CiteScore
11.20
自引率
4.10%
发文量
689
审稿时长
16 weeks
期刊介绍: Scientific Data is an open-access journal focused on data, publishing descriptions of research datasets and articles on data sharing across natural sciences, medicine, engineering, and social sciences. Its goal is to enhance the sharing and reuse of scientific data, encourage broader data sharing, and acknowledge those who share their data. The journal primarily publishes Data Descriptors, which offer detailed descriptions of research datasets, including data collection methods and technical analyses validating data quality. These descriptors aim to facilitate data reuse rather than testing hypotheses or presenting new interpretations, methods, or in-depth analyses.
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