稳定选择和随机游走的结合与硬松的系统发育信号有关。

IF 3.6 2区 生物学 Q1 PLANT SCIENCES
Jorge Cruz-Nicolás, David S Gernandt
{"title":"稳定选择和随机游走的结合与硬松的系统发育信号有关。","authors":"Jorge Cruz-Nicolás, David S Gernandt","doi":"10.1093/aob/mcaf147","DOIUrl":null,"url":null,"abstract":"<p><strong>Background and aims: </strong>Although phylogenetic niche conservatism is widely accepted, in many cases the cause of this conservatism is unclear. The presence of phylogenetic signal could extend to morphological and anatomical characters, chemical soil properties and DNA content. However, as sessile organisms, especially those that migrated toward drier or tropical conditions, are subject to environmental heterogeneity, phylogenetic signal in these characters could be explained by a combination of different evolutionary forces.</p><p><strong>Methods: </strong>We assessed the phylogenetic signal in DNA content, chemical soil properties, climate and morphoanatomical characteristics, tested different evolutionary models and performed an ancestral state reconstruction in 30 species of hard pines geographically distributed in North America, Mexico, Central America and the Caribbean. To reinforce our hypothesis of phylogenetic niche conservatism, we applied a niche similarity test among different species pairs, performed ecological niche modelling and projected these models in geographical space.</p><p><strong>Key results: </strong>We found strong phylogenetic signals in the characters evaluated, indicating a retention of characteristics throughout the evolutionary history of these pines. The best models to explain these phylogenetic signals were Ornstein-Uhlenbeck, Brownian Motion and Early Burst, indicating the action of stabilizing selection, with an input of random walk. The detection of niche overlap supported our hypothesis of phylogenetic niche conservatism; however, we found more similarity than expected in more phylogenetically distant species.</p><p><strong>Conclusions: </strong>Overall, we detected strong phylogenetic signal, and our results supported the hypothesis of phylogenetic niche conservatism, but there was more similarity in some species that have evolved under similar selective pressures independent of phylogenetic relationships. No single evolutionary model fully explains trait divergence; depending on the specific trait, divergence could be explained primarily by stabilizing selection or random walk in these hard pines.</p>","PeriodicalId":8023,"journal":{"name":"Annals of botany","volume":" ","pages":"821-836"},"PeriodicalIF":3.6000,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12464948/pdf/","citationCount":"0","resultStr":"{\"title\":\"A combination of stabilizing selection and random walk are associated with phylogenetic signal in hard pines.\",\"authors\":\"Jorge Cruz-Nicolás, David S Gernandt\",\"doi\":\"10.1093/aob/mcaf147\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background and aims: </strong>Although phylogenetic niche conservatism is widely accepted, in many cases the cause of this conservatism is unclear. The presence of phylogenetic signal could extend to morphological and anatomical characters, chemical soil properties and DNA content. However, as sessile organisms, especially those that migrated toward drier or tropical conditions, are subject to environmental heterogeneity, phylogenetic signal in these characters could be explained by a combination of different evolutionary forces.</p><p><strong>Methods: </strong>We assessed the phylogenetic signal in DNA content, chemical soil properties, climate and morphoanatomical characteristics, tested different evolutionary models and performed an ancestral state reconstruction in 30 species of hard pines geographically distributed in North America, Mexico, Central America and the Caribbean. To reinforce our hypothesis of phylogenetic niche conservatism, we applied a niche similarity test among different species pairs, performed ecological niche modelling and projected these models in geographical space.</p><p><strong>Key results: </strong>We found strong phylogenetic signals in the characters evaluated, indicating a retention of characteristics throughout the evolutionary history of these pines. The best models to explain these phylogenetic signals were Ornstein-Uhlenbeck, Brownian Motion and Early Burst, indicating the action of stabilizing selection, with an input of random walk. The detection of niche overlap supported our hypothesis of phylogenetic niche conservatism; however, we found more similarity than expected in more phylogenetically distant species.</p><p><strong>Conclusions: </strong>Overall, we detected strong phylogenetic signal, and our results supported the hypothesis of phylogenetic niche conservatism, but there was more similarity in some species that have evolved under similar selective pressures independent of phylogenetic relationships. No single evolutionary model fully explains trait divergence; depending on the specific trait, divergence could be explained primarily by stabilizing selection or random walk in these hard pines.</p>\",\"PeriodicalId\":8023,\"journal\":{\"name\":\"Annals of botany\",\"volume\":\" \",\"pages\":\"821-836\"},\"PeriodicalIF\":3.6000,\"publicationDate\":\"2025-09-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12464948/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Annals of botany\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1093/aob/mcaf147\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Annals of botany","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1093/aob/mcaf147","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0

摘要

背景和目的:尽管系统发育生态位保守性被广泛接受,但在许多情况下,这种保守性的原因尚不清楚。系统发育信号的存在可以延伸到形态解剖特征、土壤化学性质和DNA含量等方面。然而,由于无根生物,特别是那些向干燥或热带环境迁移的生物,受到环境异质性的影响,这些特征中的系统发育信号可以用不同进化力量的组合来解释。方法:研究了分布在北美、墨西哥、中美洲和加勒比地区的30种硬松的DNA含量、土壤化学性质、气候和形态解剖学特征等系统发育信号,测试了不同的进化模型,并进行了祖先状态重建。为了验证系统发育生态位保守性假设,我们在不同物种对间进行了生态位相似性检验,建立了生态位模型并在地理空间上进行了投影。关键结果:我们在这些被评估的特征中发现了很强的系统发育信号,表明这些松树在整个进化历史中保留了特征。解释这些系统发育信号的最佳模型是Ornstein-Uhlenbeck、Brownian motion和Early burst,它们表明了稳定选择的作用,并输入了随机游走。生态位重叠的发现支持了我们的系统发育生态位保守性假说;然而,我们发现在系统发育较远的物种中存在比预期更多的相似性。结论:总体而言,我们检测到较强的系统发育信号,我们的结果支持系统发育生态位保守性假设,但在一些独立于系统发育关系的物种中,在相似的选择压力下进化的相似性更大。没有单一的进化模型能完全解释性状差异;根据不同的性状,分化主要可以用稳定选择或随机游走来解释。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A combination of stabilizing selection and random walk are associated with phylogenetic signal in hard pines.

Background and aims: Although phylogenetic niche conservatism is widely accepted, in many cases the cause of this conservatism is unclear. The presence of phylogenetic signal could extend to morphological and anatomical characters, chemical soil properties and DNA content. However, as sessile organisms, especially those that migrated toward drier or tropical conditions, are subject to environmental heterogeneity, phylogenetic signal in these characters could be explained by a combination of different evolutionary forces.

Methods: We assessed the phylogenetic signal in DNA content, chemical soil properties, climate and morphoanatomical characteristics, tested different evolutionary models and performed an ancestral state reconstruction in 30 species of hard pines geographically distributed in North America, Mexico, Central America and the Caribbean. To reinforce our hypothesis of phylogenetic niche conservatism, we applied a niche similarity test among different species pairs, performed ecological niche modelling and projected these models in geographical space.

Key results: We found strong phylogenetic signals in the characters evaluated, indicating a retention of characteristics throughout the evolutionary history of these pines. The best models to explain these phylogenetic signals were Ornstein-Uhlenbeck, Brownian Motion and Early Burst, indicating the action of stabilizing selection, with an input of random walk. The detection of niche overlap supported our hypothesis of phylogenetic niche conservatism; however, we found more similarity than expected in more phylogenetically distant species.

Conclusions: Overall, we detected strong phylogenetic signal, and our results supported the hypothesis of phylogenetic niche conservatism, but there was more similarity in some species that have evolved under similar selective pressures independent of phylogenetic relationships. No single evolutionary model fully explains trait divergence; depending on the specific trait, divergence could be explained primarily by stabilizing selection or random walk in these hard pines.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Annals of botany
Annals of botany 生物-植物科学
CiteScore
7.90
自引率
4.80%
发文量
138
审稿时长
3 months
期刊介绍: Annals of Botany is an international plant science journal publishing novel and rigorous research in all areas of plant science. It is published monthly in both electronic and printed forms with at least two extra issues each year that focus on a particular theme in plant biology. The Journal is managed by the Annals of Botany Company, a not-for-profit educational charity established to promote plant science worldwide. The Journal publishes original research papers, invited and submitted review articles, ''Research in Context'' expanding on original work, ''Botanical Briefings'' as short overviews of important topics, and ''Viewpoints'' giving opinions. All papers in each issue are summarized briefly in Content Snapshots , there are topical news items in the Plant Cuttings section and Book Reviews . A rigorous review process ensures that readers are exposed to genuine and novel advances across a wide spectrum of botanical knowledge. All papers aim to advance knowledge and make a difference to our understanding of plant science.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信