用多温度、时间分辨连续晶体学研究酶动力学的调节

IF 15.7 1区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Eike C. Schulz, Andreas Prester, David von Stetten, Gargi Gore, Caitlin E. Hatton, Kim Bartels, Jan-Philipp Leimkohl, Hendrik Schikora, Helen M. Ginn, Friedjof Tellkamp, Pedram Mehrabi
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引用次数: 0

摘要

绝大多数蛋白质结构是在远离生理条件的低温下确定的。然而,温度是理解蛋白质在其天然环境中的构象动力学和功能的基本热力学参数。时间分辨晶体学是一种旨在通过检查配体结合、催化或变构过程中的结构变化来阐明蛋白质功能的技术。然而,这种方法通常是在环境条件下进行的,这可能会模糊关键的构象状态,而这些构象状态只有在生理温度下才能看到。在这项研究中,我们通过一种方法直接解决了蛋白质结构和活性之间的相互作用,该方法可以在低于10°C到高于70°C的温度窗口内进行多温度、时间分辨的连续晶体学实验。通过5D-SSX,现在可以在生理温度和长时间延迟下进行时间分辨实验,从而深入了解蛋白质功能和酶催化。我们的研究结果表明,在完整的蛋白质结构中,中温性β-内酰胺酶CTX-M-14和亲热性木糖异构酶的周转动力学的温度依赖性调节
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Probing the modulation of enzyme kinetics by multi-temperature, time-resolved serial crystallography

Probing the modulation of enzyme kinetics by multi-temperature, time-resolved serial crystallography

The vast majority of protein structures are determined at cryogenic temperatures, which are far from physiological conditions. Nevertheless, it is well established that temperature is an essential thermodynamic parameter for understanding the conformational dynamics and functionality of proteins in their native environments. Time-resolved crystallography is a technique that aims to elucidate protein function by examining structural alterations during processes such as ligand binding, catalysis, or allostery. However, this approach is typically conducted under ambient conditions, which may obscure crucial conformational states, that are only visible at physiological temperatures. In this study, we directly address the interplay between protein structure and activity via a method that enables multi-temperature, time-resolved serial crystallography experiments in a temperature window from below 10 °C to above 70 °C. Via this 5D-SSX, time-resolved experiments can now be carried out at physiological temperatures and with long time delays, providing insights into protein function and enzyme catalysis. Our findings demonstrate the temperature-dependent modulation of turnover kinetics for the mesophilic β-lactamase CTX-M-14 and the thermophilic enzyme xylose isomerase, within the full protein structure

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来源期刊
Nature Communications
Nature Communications Biological Science Disciplines-
CiteScore
24.90
自引率
2.40%
发文量
6928
审稿时长
3.7 months
期刊介绍: Nature Communications, an open-access journal, publishes high-quality research spanning all areas of the natural sciences. Papers featured in the journal showcase significant advances relevant to specialists in each respective field. With a 2-year impact factor of 16.6 (2022) and a median time of 8 days from submission to the first editorial decision, Nature Communications is committed to rapid dissemination of research findings. As a multidisciplinary journal, it welcomes contributions from biological, health, physical, chemical, Earth, social, mathematical, applied, and engineering sciences, aiming to highlight important breakthroughs within each domain.
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