心力衰竭中与焦热相关的关键基因的鉴定与分析。

IF 1.5 4区 医学 Q3 CARDIAC & CARDIOVASCULAR SYSTEMS
Jing Zhang, Zhijie Yue, Na Zhu, Na Zhao
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引用次数: 0

摘要

背景:焦亡在心力衰竭(HF)的发病机制中起着关键作用。然而,目前对热释热相关基因(PRGs)如何影响HF的了解很少。本研究旨在从生物信息学角度探讨PRGs与HF之间的联系。方法:本研究涉及三个心衰数据集。候选基因是通过重叠两组基因来鉴定的。第一组由差异表达分析的差异表达基因组成。第二组包括加权基因共表达网络分析的关键模块基因。此外,基于机器学习算法筛选关键基因。此外,还进行了免疫浸润分析和mrna -转录因子/药物调控网络构建。最终,我们也验证了关键基因的表达。结果:在本研究中,我们确定了七个关键基因(SNORD76, RPS3A, SNORD1A, CCDC159, AMT, RANBP6和CRAT)在HF中具有较强的诊断潜力。我们发现五种不同的免疫细胞类型与这些关键基因显著相关。CRAT和AMT受PHF8调控。此外,AMT、RPS3A和CRAT对应于8种潜在的治疗药物。重要的是,CCDC159、CRAT和AMT的表达与数据集一致。结论:我们确定了与HF密切相关的7个关键基因,为HF的治疗靶点提供了新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification and analysis of pyroptosis-related key genes in heart failure.

Background: Pyroptosis plays a pivotal role in the pathogenesis of Heart Failure (HF). However, the current understanding of how pyroptosis-related genes (PRGs) influence HF is scarce. This study aimed to explore the link between PRGs and HF based on bioinformatics.

Methods: Three datasets of HF were involved in this study.Candidate genes were identified by overlapping two sets of genes. The first set consisted of differentially expressed genes from differential expression analysis. The second set included critical module genes from weighted gene co-expression network analysis. Further, the key genes were screened based on machine learning algorithms. Furthermore, immune infiltration analysis and mRNA-Transcription factor (TF)/drug regulatory networks construction were implemented. Ultimately, we also verified the expression of key genes.

Results: In this study, we pinpointed seven key genes (SNORD76, RPS3A, SNORD1A, CCDC159, AMT, RANBP6, and CRAT) exhibiting superior diagnostic potential in HF. We found five distinct immune cell types to be significantly associated with these key genes. Moreover, CRAT and AMT were subject to regulation by PHF8. Additionally, AMT, RPS3A, and CRAT corresponded to eight potential therapeutic drugs. Importantly, the expression of CCDC159, CRAT, and AMT was consistent with the dataset.

Conclusion: We identified the seven key genes that were intimately associated with HF, offering novel insights into the therapeutic targets for HF.

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来源期刊
Journal of Cardiothoracic Surgery
Journal of Cardiothoracic Surgery 医学-心血管系统
CiteScore
2.50
自引率
6.20%
发文量
286
审稿时长
4-8 weeks
期刊介绍: Journal of Cardiothoracic Surgery is an open access journal that encompasses all aspects of research in the field of Cardiology, and Cardiothoracic and Vascular Surgery. The journal publishes original scientific research documenting clinical and experimental advances in cardiac, vascular and thoracic surgery, and related fields. Topics of interest include surgical techniques, survival rates, surgical complications and their outcomes; along with basic sciences, pediatric conditions, transplantations and clinical trials. Journal of Cardiothoracic Surgery is of interest to cardiothoracic and vascular surgeons, cardiothoracic anaesthesiologists, cardiologists, chest physicians, and allied health professionals.
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