揭示Piper chaba Hunter的治疗潜力:计算方法揭示阿尔茨海默病的靶向蛋白质。

IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
BioMed Research International Pub Date : 2025-07-07 eCollection Date: 2025-01-01 DOI:10.1155/bmri/8892801
Md Sifat Rahi, Md Shahedur Rahman, Rima Islam Meem, Md Ebrahim Khalil Shimul, Nahid Farnaj, Md Humaun Kabir, Fee Faysal Ahmed, Md Anowar Khasru Parvez, Md Amdadul Huq, Tabassum Kabir, Abdel Halim Harrath, Mahadi Hasan, Md Ataur Rahman
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引用次数: 0

摘要

阿尔茨海默病(AD)是一种常见的神经退行性疾病,而现有的治疗主要侧重于减轻症状,而不是解决潜在的病理生理。为了寻找一种更安全的替代品,该研究通过揭示主要信号通路、关键参与者及其与植物提取物中植物化学物质的相互作用,探索了Piper chaba Hunter作为一种有前途的AD药物先导物的潜力。首先,采用气相色谱-质谱法鉴定了恰巴果粗提取物中的植物化学成分,并用SwissADME对其理化性质进行了验证。通过分析蛋白-蛋白相互作用(PPI)和信号通路-靶蛋白-化合物(STC)网络,在严格筛选的基础上,挖掘出AD的靶蛋白和有效化合物。大约60个与gc - ms鉴定的化合物相互作用的靶蛋白通过PPI和STC网络鉴定出了5个化合物、1个信号通路和3个具有治疗潜力的靶蛋白。二氯[7.2.0]十一-4-烯、4,11,11-三甲基-8-亚甲基-、[1R-(1R∗,4Z,9S∗)]、2-甲氧基苯甲酸、2,3-二氯苯酯和(E)-3-丁基-4,5-二氢异苯并呋喃-1(3H)- 1有可能调节代谢信号通路中的PTGS2、PLA2G4A和CYP2C19,从而成为有希望的治疗药物。此外,分子对接试验(MDTs)、分子动力学模拟(mds)和量子化学分析证实了这些植物化学物质的药物可能性和功效,证实了它们抑制关键靶点以减轻ad相关病理的能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Unveiling the Therapeutic Potential of Piper chaba Hunter: Computational Approaches Shed Light on Targeting Proteins in Alzheimer's Disease.

Alzheimer's disease (AD) is a prevalent neurodegenerative disorder, while the existing treatments primarily focus on alleviating symptoms rather than addressing the underlying pathophysiology. Seeking a safer alternative, the study explores the potential of Piper chaba Hunter as a promising drug lead for AD by eliciting the major signaling pathway, key players, and their interaction with phytochemicals from the plant extract. Initially, the phytochemicals in the P. chaba crude extract were identified using GC-MS, and their physicochemical properties were verified using SwissADME. Protein-protein interaction (PPI) and signaling pathways-target proteins-compounds (STC) networks were analyzed to dig out target proteins and effective compounds for AD based on rigorous screening. Approximately 60 target proteins that interacted with GC-MS-identified compounds underwent PPI and STC networking which identified five compounds, a signaling pathway, and three target proteins with therapeutic potential. Three compounds, namely, bicyclo[7.2.0]undec-4-ene, 4,11,11-trimethyl-8-methylene-,[1R-(1R∗,4Z,9S∗)], 2-methoxybenzoic acid, 2,3-dichlorophenyl ester, and (E)-3-butylidene-4,5-dihydroisobenzofuran-1(3H)-one, have the potential to modulate PTGS2, PLA2G4A, and CYP2C19 within metabolic signaling pathway, thus serving as promising therapeutic agents. Moreover, the drug likeliness and efficacy of those phytochemicals were justified by molecular docking tests (MDTs), molecular dynamics simulations (MDSs), and quantum chemistry analyses, which confirmed their ability to inhibit key targets to mitigate AD-associated pathology.

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来源期刊
BioMed Research International
BioMed Research International BIOTECHNOLOGY & APPLIED MICROBIOLOGY-MEDICINE, RESEARCH & EXPERIMENTAL
CiteScore
6.70
自引率
0.00%
发文量
1942
审稿时长
19 weeks
期刊介绍: BioMed Research International is a peer-reviewed, Open Access journal that publishes original research articles, review articles, and clinical studies covering a wide range of subjects in life sciences and medicine. The journal is divided into 55 subject areas.
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