在一项多组学研究中,CXCL14通过NF-κB通路激活驱动年龄相关性椎间盘退变。

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Tianle Zhou, Tonghui Zhang, Qiwang He, Zhiwen Zhang, Yong Huang, Zijun Chen, Wei Wang
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引用次数: 0

摘要

椎间盘退变(IDD)是慢性腰痛的常见原因,严重影响日常生活。尽管先前的研究已经确定了一些指示缺乏症的生物标志物,但缺乏整合转录组学和蛋白质组学数据的综合分析来阐明缺乏症的年龄相关变化。我们通过整合转录组学和蛋白质组学分析来确定关键的分子特征,这些分子特征可能是改善年龄相关性IDD治疗的潜在治疗靶点。我们使用转录组学和蛋白质组学分析来鉴定与IDD相关的关键调控基因。我们对3例老年IDD患者和3例年轻椎间盘病变患者进行了RNA测序和质谱分析。采用统计学分析和GO和KEGG富集分析来解释转录组学和蛋白质组学数据。使用外部数据集和RT-qPCR进行验证。基因调控网络和ceRNA网络分析揭示了与特征基因相关的因素。转录组学和蛋白质组学分析显示,45个差异表达基因(DEGs)和34个差异表达蛋白(DEPs)与IDD相关。我们发现CXCL14是唯一在IDD中转录组(4.2倍,p
本文章由计算机程序翻译,如有差异,请以英文原文为准。

CXCL14 drives age-related intervertebral disc degeneration via NF-κB pathway activation in a multiomic study.

CXCL14 drives age-related intervertebral disc degeneration via NF-κB pathway activation in a multiomic study.

CXCL14 drives age-related intervertebral disc degeneration via NF-κB pathway activation in a multiomic study.

CXCL14 drives age-related intervertebral disc degeneration via NF-κB pathway activation in a multiomic study.

Intervertebral disc degeneration (IDD), a common cause of chronic low back pain, strongly impacts daily life. Although previous studies have identified certain biomarkers indicating IDD, comprehensive analyses that integrate transcriptomic and proteomic data to elucidate age-related changes in IDD are lacking. We addressed this issue by integrating transcriptomic and proteomic analyses to identify key molecular signatures that may be potential therapeutic targets for improving the treatment of age-related IDD. We used transcriptomic and proteomic analyses to identify key regulatory genes associated with IDD. We performed RNA sequencing and mass spectrometry of 3 elderly patients with IDD and 3 younger patients with intervertebral disc lesions. Statistical analysis and GO and KEGG enrichment analyses were employed to interpret the transcriptomic and proteomic data. Validation was performed with external datasets and RT‒qPCR. Gene regulatory network and ceRNA network analyses revealed the factors associated with characteristic genes. Transcriptomic and proteomic analyses revealed 45 differentially expressed genes (DEGs) and 34 differentially expressed proteins (DEPs) associated with IDD. We identified CXCL14 as the sole molecule significantly upregulated in IDD at both the transcriptome (4.2-fold, p < 0.001) and proteome levels (3.8-fold, p = 0.003). RT‒qPCR confirmed CXCL14 overexpression in elderly IDD patients (|log2-fold change| =4.1, p < 0.001), consistent with external dataset analysis (GSE147383: |log2-fold change| =1.3, p = 0.008). Gene regulatory networks revealed that CXCL14 interacts with inflammatory mediators (IL-1β and TNF-α) and activates the NF-κB pathway, a key driver of extracellular matrix degradation and inflammation. ceRNA network analysis further identified hsa-miR-582-3p and hsa-miR-150-5p as potential upstream regulators of CXCL14. We analysed the expression profiles of elderly IDD patients and younger patients through transcriptomic and proteomic analyses, identifying unique molecular features associated with IDD. These findings lay a foundation for developing targeted treatments for elderly IDD patients and provide broader insights into potential therapeutic strategies for managing ageing-related IDD across different patient populations. CXCL14 is a potential therapeutic target for pain associated with age-related IDD and could inform the development of novel drug therapies and diagnostic tools, potentially improving clinical outcomes and providing a basis for personalized treatment approaches in managing chronic low back pain and IDD.

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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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