多模态OF-MTMFL:用于组织病理图像分割的半监督平均教师模型。

IF 2.1 3区 工程技术 Q2 ANATOMY & MORPHOLOGY
R Christal Jebi
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引用次数: 0

摘要

在快速发展的组织病理学图像分析领域,关键特征的准确分割对于医学诊断至关重要,因为它使病理学家能够做出精确的决策。提出了一种基于前一模型的联邦学习平均教师模型(OF-MTMFL)系统,该系统结合了前沿的半监督学习和联邦学习技术来解决注释数据有限和班级不平衡等问题。该框架采用平均教师架构,其中学生模型在焦点损失函数的指导下,优先考虑未标记数据中的高置信度区域,而教师模型通过指数移动平均线(EMA)更新确保一致性。为了进一步提高分割精度,采用多尺度关注模块进行鲁棒特征提取。此外,该系统还集成了联邦学习机制,允许多个机构在不共享原始数据(包括来自癌症基因组图谱(TCGA)的数据集)的情况下进行协作。TCGA数据的分析结果表明,所建立的of - mtmfl模型在膀胱尿路上皮癌(BLCA)、乳腺浸润性癌(BRCA)、胶质母细胞瘤和低级别胶质瘤(GBMLGG)、肺腺癌(LUAD)和子宫内膜癌(UCEC)的平均一致性指数(c-index)分别为0.700±0.030、0.720±0.040、0.860±0.025、0.690±0.035和0.740±0.045。of - mtmfl模型在这些癌症类型中的总体表现得分为0.740,在GBMLGG中表现出特别强的结果,同时在其他癌症类型中保持竞争得分。报告的标准差反映了每个类别中不同样本的模型性能的可变性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Multimodal OF-MTMFL: A Semi-Supervised Mean Teacher Model for Histopathological Image Segmentation.

In the rapidly advancing field of histopathological image analysis, accurate segmentation of critical features is crucial for medical diagnostics, as it enables pathologists to make precise decisions. The proposed One Former-based Mean Teacher Model with Federated Learning (OF-MTMFL) system combines cutting-edge semi-supervised learning and federated learning techniques to tackle issues such as limited annotated data and class imbalance. The framework utilizes a mean teacher architecture, where the student model, guided by a focal loss function, prioritizes high-confidence regions in unlabeled data, while the teacher model ensures consistency through Exponential Moving Average (EMA) updates. To further enhance segmentation accuracy, multi-scale attention modules are employed for robust feature extraction. Additionally, the system incorporates a Federated Learning mechanism that allows multiple institutions to collaborate without sharing raw data, including datasets from the Cancer Genome Atlas (TCGA). The results from the analysis of the TCGA dataset indicate that the proposed OF-MTMFL model achieved mean concordance index (c-index) scores of 0.700 ± 0.030 for Bladder Urothelial Carcinoma (BLCA), 0.720 ± 0.040 for Breast Invasive Carcinoma (BRCA), 0.860 ± 0.025 for Glioblastoma & Lower Grade Glioma (GBMLGG), 0.690 ± 0.035 for Lung Adenocarcinoma (LUAD), and 0.740 ± 0.045 for Uterine Corpus Endometrial Carcinoma (UCEC). The overall performance score of the OF-MTMFL model across these cancer types is 0.740, demonstrating particularly strong results in GBMLGG while maintaining competitive scores in the other cancer types. The standard deviations reported reflect the variability of the model's performance across different samples within each category.

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来源期刊
Microscopy Research and Technique
Microscopy Research and Technique 医学-解剖学与形态学
CiteScore
5.30
自引率
20.00%
发文量
233
审稿时长
4.7 months
期刊介绍: Microscopy Research and Technique (MRT) publishes articles on all aspects of advanced microscopy original architecture and methodologies with applications in the biological, clinical, chemical, and materials sciences. Original basic and applied research as well as technical papers dealing with the various subsets of microscopy are encouraged. MRT is the right form for those developing new microscopy methods or using the microscope to answer key questions in basic and applied research.
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