综合基因组分析鉴定胃癌临床相关分子亚型和双歧杆菌相关预后特征

IF 3.2 4区 医学 Q3 IMMUNOLOGY
Yatao Wang, Fengqin Guo, Wei Song, Yanliang Liu, Qijun Xiang
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引用次数: 0

摘要

二硫细胞凋亡是一种新定义的二硫应激诱导的细胞死亡。然而,在胃癌(GC)中,二硫中毒相关基因(DRGs)的预后作用及其与肿瘤微环境(TME)的相关性尚存在空白。在这里,我们系统地研究了基因组和转录水平的DRG变化、预后价值及其在GC中的表达模式。采用15种DRGs对不同亚型进行鉴定,观察各亚型预后及免疫浸润的差异。我们确定了3种不同的分子亚型,并观察到3种亚型在临床结果和浸润免疫细胞方面的深刻差异。随后,基于重叠的双睑下垂表型相关差异表达基因构建了双睑下垂相关特征(DRG_score),并在外部队列中进行了验证。多因素分析证实DRG_score可作为独立的GC预后指标,并构建nomogram来提高DRG_score的临床适用性。此外,在2个DRG_score组中,TME、多个免疫检查点的表达、微卫星状态、肿瘤突变负担和对不同化疗药物的反应均存在显著差异。DRG_score越低,TME细胞浸润越明显,对免疫治疗反应越好。总之,我们对GC的DRG特征进行了全面的概述,并为GC患者开发了一种新的特征。这些发现可以帮助我们更好地了解GC中的DRG,并为今后针对GC中的二硫下垂的研究提供理论基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Integrated Genomic Analysis Identifies Clinically Relevant Molecular Subtypes and Disulfidptosis-Related Prognostic Signature of Gastric Cancer.

Disulfidptosis is a newly defined disulfide stress-induced cell death. However, there are gaps in the prognostic role of disulfidptosis-related genes (DRGs) and their correlation with the tumor microenvironment (TME) in gastric cancer (GC). In here, we systematically investigated DRG changes at genomic and transcriptional levels, prognostic value, and their expression patterns in GC. Fifteen DRGs were used to identify the different subtypes, and the differences in prognosis and immune infiltration among the subtypes were examined. We identified 3 distinct molecular subtypes and observed profound differences among the 3 subtypes in clinical outcomes and infiltrating immune cells. Subsequently, a disulfidptosis-related signature (DRG_score) was constructed based on the overlapped disulfidptosis phenotype-related differentially expressed genes and was verified in an external cohort. The multivariate analysis confirmed that the DRG_score serves as an independent prognostic indicator for GC, and then a nomogram was built to increase the clinical applicability of the DRG_score. Furthermore, significant variations were observed in the TME, expression of multiple immune checkpoints, microsatellite status, tumor mutational burden, and response to different chemotherapeutics among the 2 DRG_score groups. A low DRG_score implies more significant TME cell infiltration and better response to immunotherapy. In conclusion, we present a comprehensive overview of the DRG profile in GC and develop a novel signature for GC patients. These findings could help us better understand DRG in GC and provide a theoretical foundation for future studies targeting disulfidptosis in GC.

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来源期刊
Journal of Immunotherapy
Journal of Immunotherapy 医学-免疫学
CiteScore
6.90
自引率
0.00%
发文量
79
审稿时长
6-12 weeks
期刊介绍: Journal of Immunotherapy features rapid publication of articles on immunomodulators, lymphokines, antibodies, cells, and cell products in cancer biology and therapy. Laboratory and preclinical studies, as well as investigative clinical reports, are presented. The journal emphasizes basic mechanisms and methods for the rapid transfer of technology from the laboratory to the clinic. JIT contains full-length articles, review articles, and short communications.
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