Chunghwan Baek, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Subin Yook, Seunghui Kwak, Jisu Kim, Taegun Seo
{"title":"淡水水生纤维藻、土壤苔藓纤维藻和树上苔藓纤维藻的分离与鉴定。","authors":"Chunghwan Baek, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Subin Yook, Seunghui Kwak, Jisu Kim, Taegun Seo","doi":"10.1099/ijsem.0.006842","DOIUrl":null,"url":null,"abstract":"<p><p>Three Gram-negative, facultatively anaerobic, rod-shaped, non-motile and reddish-pigmented bacterial strains, designated GW2-5<sup>T</sup>, WM1<sup>T</sup> and Tmos10<sup>T</sup>, were isolated from distinct environments in the Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the three strains belonged to the genus <i>Fibrella</i>. The type strain GW2-5ᵀ grew at temperatures of 10-35 °C (optimum: 25 °C), pH levels of 6.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-0.5% (optimum: 0%). Strain WM1ᵀ grew at temperatures of 10-37 °C (optimum: 30 °C), pH levels of 5.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-1% (optimum: 0%). Strain Tmos10ᵀ grew at temperatures of 10-35 °C (optimum: 25 °C), pH levels of 5.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-0.5% (optimum: 0%). The three strains exhibited the highest 16S rRNA gene sequence similarity to <i>Fibrella forsythiae</i> HMF5405ᵀ (98.7%) for strain GW2-5ᵀ, <i>Fibrella aestuarina</i> BUZ 2ᵀ (98.7%) for strain WM1ᵀ and <i>Fibrella forsythiae</i> HMF5405ᵀ (96.6%) for strain Tmos10ᵀ. The average nucleotide identity values ranged from 73.5% to 86.6%, while the digital DNA-DNA hybridization values ranged from 19.5% to 31.4% between the three novel isolates and species belonging to the genus <i>Fibrella</i>. Based on phenotypic, physiological, biochemical, genomic and phylogenetic characteristics, strains GW2-5<sup>T</sup>, WM1<sup>T</sup> and Tmos10<sup>T</sup> are proposed as novel species within the genus <i>Fibrella</i>. They are designated as <i>Fibrella aquatica</i> sp. nov. (type strain GW2-5<sup>T</sup>=KACC 23817<sup>T</sup>=TBRC 19128<sup>T</sup>), <i>Fibrella musci</i> sp. nov. (type strain WM1<sup>T</sup>=KACC 23815<sup>T</sup>=TBRC 19127<sup>T</sup>) and <i>Fibrella arboris</i> sp. nov. (type strain Tmos10<sup>T</sup>=KACC 23816<sup>T</sup>=TBRC 19129<sup>T</sup>), respectively.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 7","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Isolation and characterization of <i>Fibrella aquatica</i> sp. nov. from freshwater, <i>Fibrella musci</i> sp. nov. from moss on soil and <i>Fibrella arboris</i> sp. nov. from moss on a tree.\",\"authors\":\"Chunghwan Baek, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Subin Yook, Seunghui Kwak, Jisu Kim, Taegun Seo\",\"doi\":\"10.1099/ijsem.0.006842\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Three Gram-negative, facultatively anaerobic, rod-shaped, non-motile and reddish-pigmented bacterial strains, designated GW2-5<sup>T</sup>, WM1<sup>T</sup> and Tmos10<sup>T</sup>, were isolated from distinct environments in the Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the three strains belonged to the genus <i>Fibrella</i>. The type strain GW2-5ᵀ grew at temperatures of 10-35 °C (optimum: 25 °C), pH levels of 6.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-0.5% (optimum: 0%). Strain WM1ᵀ grew at temperatures of 10-37 °C (optimum: 30 °C), pH levels of 5.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-1% (optimum: 0%). Strain Tmos10ᵀ grew at temperatures of 10-35 °C (optimum: 25 °C), pH levels of 5.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-0.5% (optimum: 0%). The three strains exhibited the highest 16S rRNA gene sequence similarity to <i>Fibrella forsythiae</i> HMF5405ᵀ (98.7%) for strain GW2-5ᵀ, <i>Fibrella aestuarina</i> BUZ 2ᵀ (98.7%) for strain WM1ᵀ and <i>Fibrella forsythiae</i> HMF5405ᵀ (96.6%) for strain Tmos10ᵀ. The average nucleotide identity values ranged from 73.5% to 86.6%, while the digital DNA-DNA hybridization values ranged from 19.5% to 31.4% between the three novel isolates and species belonging to the genus <i>Fibrella</i>. Based on phenotypic, physiological, biochemical, genomic and phylogenetic characteristics, strains GW2-5<sup>T</sup>, WM1<sup>T</sup> and Tmos10<sup>T</sup> are proposed as novel species within the genus <i>Fibrella</i>. They are designated as <i>Fibrella aquatica</i> sp. nov. (type strain GW2-5<sup>T</sup>=KACC 23817<sup>T</sup>=TBRC 19128<sup>T</sup>), <i>Fibrella musci</i> sp. nov. (type strain WM1<sup>T</sup>=KACC 23815<sup>T</sup>=TBRC 19127<sup>T</sup>) and <i>Fibrella arboris</i> sp. nov. (type strain Tmos10<sup>T</sup>=KACC 23816<sup>T</sup>=TBRC 19129<sup>T</sup>), respectively.</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 7\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006842\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006842","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Isolation and characterization of Fibrella aquatica sp. nov. from freshwater, Fibrella musci sp. nov. from moss on soil and Fibrella arboris sp. nov. from moss on a tree.
Three Gram-negative, facultatively anaerobic, rod-shaped, non-motile and reddish-pigmented bacterial strains, designated GW2-5T, WM1T and Tmos10T, were isolated from distinct environments in the Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the three strains belonged to the genus Fibrella. The type strain GW2-5ᵀ grew at temperatures of 10-35 °C (optimum: 25 °C), pH levels of 6.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-0.5% (optimum: 0%). Strain WM1ᵀ grew at temperatures of 10-37 °C (optimum: 30 °C), pH levels of 5.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-1% (optimum: 0%). Strain Tmos10ᵀ grew at temperatures of 10-35 °C (optimum: 25 °C), pH levels of 5.0-12.0 (optimum: pH 7.0) and NaCl concentrations of 0-0.5% (optimum: 0%). The three strains exhibited the highest 16S rRNA gene sequence similarity to Fibrella forsythiae HMF5405ᵀ (98.7%) for strain GW2-5ᵀ, Fibrella aestuarina BUZ 2ᵀ (98.7%) for strain WM1ᵀ and Fibrella forsythiae HMF5405ᵀ (96.6%) for strain Tmos10ᵀ. The average nucleotide identity values ranged from 73.5% to 86.6%, while the digital DNA-DNA hybridization values ranged from 19.5% to 31.4% between the three novel isolates and species belonging to the genus Fibrella. Based on phenotypic, physiological, biochemical, genomic and phylogenetic characteristics, strains GW2-5T, WM1T and Tmos10T are proposed as novel species within the genus Fibrella. They are designated as Fibrella aquatica sp. nov. (type strain GW2-5T=KACC 23817T=TBRC 19128T), Fibrella musci sp. nov. (type strain WM1T=KACC 23815T=TBRC 19127T) and Fibrella arboris sp. nov. (type strain Tmos10T=KACC 23816T=TBRC 19129T), respectively.
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.