跨多个国家猴痘病毒的综合基因组、突变、系统发育和统计分析。

IF 2.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Indian Journal of Microbiology Pub Date : 2025-06-01 Epub Date: 2025-01-16 DOI:10.1007/s12088-025-01447-2
Imran Zafar, Faheem Kanwal, Muhammad Azmat, Ahsanullah Unar, Ijaz Ali, Waqas Yousaf, Qurat Ul Ain, Mohd Ashraf Rather, Nemat Ali, Mohammad Rashid Khan, Amandeep Singh Dhanju, Rohit Sharma
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引用次数: 0

摘要

我们的研究提供了一个全面的猴痘病毒(MPXV)分析,利用创新的协议来发现潜在的漏洞。我们研究了MPXV的流行病学,与天花的联系,基因组学,突变景观,临床特征,诊断,治疗,fda批准的药物,临床试验和预防策略。我们使用各种分析方法分析NCBI数据库(2019-2023)的基因组数据,以评估序列比对、蛋白质鉴定和基因组多样性。系统基因组学分析确定了独特的谱系和与人类传播相关的突变,揭示了24种MPXV蛋白特别容易发生突变。结构域分析证实了保守的正痘病毒基因和关键区域,为MPXV的结构、多样性和宿主相互作用提供了见解。此外,我们整合了临床数据、地理空间制图、统计分析和AI/ML,以预测MPXV的进展。我们还探索了生物信息学工具和基于植物的治疗方法,进行了计算机研究,以确定潜在的药物靶点。我们的研究整合了流行病学和基因组数据,为实时预防措施提供信息,并优化MPXV的公共卫生应对措施。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comprehensive Genomic, Mutation, Phylogenetic, and Statistical Analysis of the Monkeypox Virus Across Multiple Countries.

Our study offers a comprehensive Monkeypox virus (MPXV) analysis, utilizing innovative protocols to uncover potential vulnerabilities. We examine MPXV's epidemiology, link to smallpox, genomics, mutation landscape, clinical features, diagnostics, therapeutics, FDA-approved drugs, clinical trials, and preventive strategies. We used various analytical methods to analyse genome data from the NCBI database (2019-2023) to assess sequence alignment, protein identification, and genome diversity. The phylogenomic analysis identified unique lineages and a mutation associated with human transmission, revealing that 24 MPXV proteins are particularly mutation-prone. Domain analysis confirmed conserved Ortho-poxvirus genes and critical regions, providing insights into MPXV's structure, diversity, and host interaction. Additionally, we integrated clinical data, geospatial mapping, statistical analysis, and AI/ML for predictive insights on MPXV progression. We also explored bioinformatics tools and plant-based treatments, conducting in-silico studies to identify potential drug targets. Our research integrates epidemiological and genomic data to inform real-time preventive measures and optimize public health responses to MPXV.

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来源期刊
Indian Journal of Microbiology
Indian Journal of Microbiology BIOTECHNOLOGY & APPLIED MICROBIOLOGY-MICROBIOLOGY
CiteScore
6.00
自引率
10.00%
发文量
51
审稿时长
1 months
期刊介绍: Indian Journal of Microbiology is the official organ of the Association of Microbiologists of India (AMI). It publishes full-length papers, short communication reviews and mini reviews on all aspects of microbiological research, published quarterly (March, June, September and December). Areas of special interest include agricultural, food, environmental, industrial, medical, pharmaceutical, veterinary and molecular microbiology.
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