新一代嗜极微生物工程中盐弧菌高效本构表达系统的建立

IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Zheng-Jun Li, Nan Pu, Bin Wei, Hao Liang
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引用次数: 0

摘要

嗜盐细菌Salinivibrio sp. TGB10代表了工业生物技术的新兴微生物底盘,但由于对调控元件的表征不足,其遗传工具包仍不发达。在这里,我们通过转录组学分析和功能验证鉴定并表征了一个新的内源性启动子(p1)。这个185 bp的启动子区域位于一个基因的上游,该基因编码一个假设的含有亮氨酸-拉链脂蛋白结构域的蛋白质,被发现包含所有必需的调控元件,包括功能性- 10元件、扩展的- 10 motif和- 35元件。通过渐进式截断和核糖体结合位点工程,我们精确地绘制了这些元件,并揭示了它们在转录起始中的代偿相互作用。接下来,我们通过在- 35到- 10个元件之间随机分配间隔区域,开发了一系列合成启动子,实现了在盐弧菌中跨越4个数量级和在大肠杆菌中跨越3个数量级的表达水平。p1启动子的实际用途是通过有效生产工业相关的β-葡萄糖苷酶,优化的发酵条件产生76.83 U/mL的活性。该研究为盐弧菌的代谢工程和合成生物学应用提供了重要的遗传工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Development of a high-efficiency constitutive expression system in Salinivibrio strain for next-generation extremophile engineering
The halophilic bacterium Salinivibrio sp. TGB10 represents an emerging microbial chassis for industrial biotechnology, yet its genetic toolkit remains underdeveloped due to insufficient characterization of regulatory elements. Here, we identified and characterized a novel endogenous promoter (p1) through transcriptomic analysis and functional validation. The 185-bp promoter region, located upstream of a gene encoding a hypothetical protein containing leucine-zipper lipoprotein domain, was found to contain all essential regulatory elements including a functional −10 element, extended −10 motif, and −35 element. Through progressive truncation and ribosome binding site engineering, we precisely mapped these elements and revealed their compensatory interactions in transcription initiation. Next, we developed a series of synthetic promoters by randomizing the spacer region between −35 and −10 elements, achieving expression levels spanning four orders of magnitude in Salinivibrio and three orders in Escherichia coli. The practical utility of p1 promoter was demonstrated through efficient production of industrially relevant β-glucosidase, with optimized fermentation conditions yielding 76.83 U/mL activity. This study provides a critical genetic toolkit for metabolic engineering and synthetic biology applications in Salinivibrio.
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来源期刊
Biochemical Engineering Journal
Biochemical Engineering Journal 工程技术-工程:化工
CiteScore
7.10
自引率
5.10%
发文量
380
审稿时长
34 days
期刊介绍: The Biochemical Engineering Journal aims to promote progress in the crucial chemical engineering aspects of the development of biological processes associated with everything from raw materials preparation to product recovery relevant to industries as diverse as medical/healthcare, industrial biotechnology, and environmental biotechnology. The Journal welcomes full length original research papers, short communications, and review papers* in the following research fields: Biocatalysis (enzyme or microbial) and biotransformations, including immobilized biocatalyst preparation and kinetics Biosensors and Biodevices including biofabrication and novel fuel cell development Bioseparations including scale-up and protein refolding/renaturation Environmental Bioengineering including bioconversion, bioremediation, and microbial fuel cells Bioreactor Systems including characterization, optimization and scale-up Bioresources and Biorefinery Engineering including biomass conversion, biofuels, bioenergy, and optimization Industrial Biotechnology including specialty chemicals, platform chemicals and neutraceuticals Biomaterials and Tissue Engineering including bioartificial organs, cell encapsulation, and controlled release Cell Culture Engineering (plant, animal or insect cells) including viral vectors, monoclonal antibodies, recombinant proteins, vaccines, and secondary metabolites Cell Therapies and Stem Cells including pluripotent, mesenchymal and hematopoietic stem cells; immunotherapies; tissue-specific differentiation; and cryopreservation Metabolic Engineering, Systems and Synthetic Biology including OMICS, bioinformatics, in silico biology, and metabolic flux analysis Protein Engineering including enzyme engineering and directed evolution.
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