机器学习在个体化肺癌治疗中的基因组分析和药物发现。

IF 3.9 4区 医学 Q1 PHARMACOLOGY & PHARMACY
Shaban Ahmad, Syed Naseer Ahmad Shah, Rafat Parveen, Khalid Raza
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引用次数: 0

摘要

肺癌是一种普遍和致命的恶性肿瘤,其特征是肺组织中异常细胞不受控制的生长,经常导致功能损害和转移。它每年约有200万新病例和180万死亡病例,是癌症死亡率的一个重要因素,预测表明这一数字将大幅增加,到2050年估计将有380万新病例和320万死亡病例。因此,早期诊断和快速药物开发策略是必要的,而基因组学用于增强其序列模式,以获得更好、精确和个性化的药物。今天,机器学习(ML)正在通过分析大型基因组学数据集来识别基因组序列模式并发现靶向和更好治疗的突变,从而改变现代基因组学和药物设计,并通过模拟化合物与已确定的生物靶点的相互作用来加速药物发现。PubMed检索是为了确定过去10年的相关出版物,并对它们进行批判性审查。ML算法,如随机森林、梯度增强、深度信念网络、自动编码器、支持向量机、卷积神经网络和循环神经网络,广泛用于现代基因组学,而强化学习、DNN、gan和gnn则用于优化和个性化药物发现。机器学习算法面临数据稀缺性和可解释性问题,挑战准确性和与实验验证的集成。随着机器学习的整合,肺癌治疗正在经历快速发展,显示出它们以惊人的准确性解决癌症相关问题的潜力,在特定应用中通常超过95%。然而,需要更多的优化来有效地整合人工智能(AI)来处理数据异质性和临床验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Machine learning for genomic profiling and drug discovery in personalised lung cancer therapeutics.

Lung cancer is a leading cause of cancer-related mortality, with approximately 2 million new cases and 1.8 million deaths annually, and studies suggest that by 2050, these numbers will reach 3.8 million cases and 3.2 million deaths. The high mortality rate highlights the urgent need for early diagnosis and rapid drug development. Genomic approaches provide insights into tumour biology, supporting personalised medicine. This study explores the role of machine learning (ML) in enhancing genomic analysis and drug discovery for lung cancer treatment. A comprehensive PubMed search was conducted to identify relevant publications from the last 10 years. Selected studies were critically reviewed to understand how ML algorithms are applied in lung cancer genomics and drug discovery. ML algorithms such as random forests, gradient boosting, support vector machines, autoencoders, CNNs, and RNNs are widely used for genomic pattern identification. Techniques like reinforcement learning, deep neural networks, GANs, and GNNs are employed for drug discovery. ML models have achieved over 95% accuracy in certain lung cancer applications. However, challenges remain, including data scarcity and model interpretability. ML significantly enhances lung cancer's genomic analysis and drug design; however, further optimisation and clinical validation are essential for effective real-world implementation.

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来源期刊
CiteScore
9.10
自引率
0.00%
发文量
165
审稿时长
2 months
期刊介绍: Journal of Drug Targeting publishes papers and reviews on all aspects of drug delivery and targeting for molecular and macromolecular drugs including the design and characterization of carrier systems (whether colloidal, protein or polymeric) for both vitro and/or in vivo applications of these drugs. Papers are not restricted to drugs delivered by way of a carrier, but also include studies on molecular and macromolecular drugs that are designed to target specific cellular or extra-cellular molecules. As such the journal publishes results on the activity, delivery and targeting of therapeutic peptides/proteins and nucleic acids including genes/plasmid DNA, gene silencing nucleic acids (e.g. small interfering (si)RNA, antisense oligonucleotides, ribozymes, DNAzymes), as well as aptamers, mononucleotides and monoclonal antibodies and their conjugates. The diagnostic application of targeting technologies as well as targeted delivery of diagnostic and imaging agents also fall within the scope of the journal. In addition, papers are sought on self-regulating systems, systems responsive to their environment and to external stimuli and those that can produce programmed, pulsed and otherwise complex delivery patterns.
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