基于非同源光谱数据融合模型的KRAS基因片段单碱基突变的细胞鉴定。

IF 2.3
Chenchen Wang, Alimire Abudureyimu, Qin Zhang, Weiquan You, Dandan Li, Xiaofan Jia, Yating Zhang, Chengjie Chen, Rong Hu, Mengyao Wang, Shangyuan Feng, Pengfei Guo, Yang Chen
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引用次数: 0

摘要

KRAS基因突变检测在结直肠癌(CRC)中的敏感性可影响预后。本研究建立了基于核磁共振(NMR)和激光镊子拉曼光谱(LTRS)的非同源光谱数据融合方法,以分析野生型细胞DKS-8和HEK-3及其各自的突变细胞DLD-1和HCT-116的代谢特性。通过多变量统计分析,发现突变型细胞与野生型细胞之间存在显著差异。筛选出牛磺酸、葡萄糖、磷胆碱、酪氨酸4种代谢物作为特征性代谢物。单碱基KRAS突变通常会改变代谢途径,如d-谷氨酰胺和d-谷氨酸代谢、丙氨酸、天冬氨酸和谷氨酸代谢以及精氨酸生物合成。结果表明,结合非同源光谱数据融合可以提高单源特征标记的可靠性。提出的策略将有利于生物医学领域的同类研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Cellular Identification of Single-Base Mutations in KRAS Gene Fragments Based on Nonhomologous Spectroscopic Data Fusion Modeling.

The sensitivity of KRAS gene mutation detection in colorectal cancer (CRC) can affect prognosis. This study established a nonhomologous spectroscopic data fusion method based on nuclear magnetic resonance (NMR) and laser tweezers Raman spectroscopy (LTRS), in order to analyze the metabolic characteristics of wild-type cells DKS-8 and HEK-3, and their respective mutant cells DLD-1 and HCT-116. Through multivariate statistical analysis, it was found that there were significant differences between mutant and wild-type cells. Four metabolites including taurine, glucose, phosphorylcholine, and tyrosine were screened as characteristic metabolites. Single-base KRAS mutations commonly alter metabolic pathways like d-glutamine and d-glutamate metabolisms, alanine, aspartate, and glutamate metabolism, and arginine biosynthesis. It is concluded that the combination of nonhomologous spectral data fusion would enhance reliability of the single source-derived characteristic markers. The proposed strategy will benefit congeneric researches in the biomedical field.

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