经验证据表明,跨膜通道内葡聚糖相互作用的氨基酸侧链共同促进纤维素合酶的功能。

IF 3.9 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Albert L Kwansa, Arielle M Chaves, Joshua T Del Mundo, Ethan T Pierce, Esther W Gomez, Enrique D Gomez, Candace H Haigler, Yaroslava G Yingling, Alison W Roberts
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引用次数: 0

摘要

纤维素合成的基本机制在多个王国中广泛保守,并且依赖于纤维素合酶,这是一种具有双重功能的2家族糖基转移酶(GT-2)。这些酶在质膜的细胞质侧聚合葡萄糖,并通过一个完整的跨膜通道将葡聚糖链输出到细胞表面。活性植物纤维素合成酶(CESAs)的结构研究揭示了新生葡聚糖链与沿TM通道排列的极性、带电和芳香氨基酸残基侧链之间的相互作用。然而,修饰这些侧链的功能后果尚未在CESAs或其他进行性gt -2中进行体内测试。为了验证这一点,我们使用了一种基于CESA5在苔藓中遗传互补的体内实验。为了准确预测葡聚糖相互作用的氨基酸残基,我们使用同源性和从头建模相结合的方法建立了PpCESA5的完整三聚体分子模型。基于全原子分子动力学的接触指标和相互作用能分析发现,在PpCESA5的TM通道内或胞外表面,23个氨基酸残基与新生葡聚糖链相互作用的倾向很高。将18个氨基酸残基中的任何一个突变为丙氨酸,从而去除它们的侧链,消除或损害CESA功能,对带电氨基酸侧链的损失影响最大。这为多个氨基酸残基共同维持TM通道内平滑的能量景观以促进葡聚糖转运的假设提供了直接证据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Empirical evidence that glucan-interacting amino acid side chains within the transmembrane channel collectively facilitate cellulose synthase function.

The fundamental mechanism of cellulose synthesis is widely conserved across Kingdoms and depends on cellulose synthases, which are processive, dual-function, family 2 glycosyltransferases (GT-2). These enzymes polymerize glucose on the cytoplasmic side of the plasma membrane and export the glucan chain to the cell surface through an integral transmembrane (TM) channel. Structural studies of active plant cellulose synthases (CESAs) have revealed interactions between the nascent glucan chain and the side chains of polar, charged, and aromatic amino acid residues that line the TM channel. However, the functional consequences of modifying these side chains have not been tested in vivo in CESAs or other processive GT-2s. To test this, we used an established in vivo assay based on genetic complementation of CESA5 in the moss, Physcomitrium patens. For accurate prediction of glucan-interacting amino acid residues, we generated a complete homotrimeric molecular model of PpCESA5 using a combination of homology and de novo modeling. All-atom molecular dynamics-based analyses of contact metrics and interaction energy identified 23 amino acid residues with high propensity to interact with the nascent glucan chain within the TM channel or on the apoplastic surface of PpCESA5. Mutating any one of 18 of these amino acid residues to alanine, thereby removing their side chains, abolished or impaired CESA function, with the strongest effects observed upon the loss of charged amino acid side chains. This provides direct evidence to support the hypothesis that multiple amino acid residues collectively maintain a smooth energy landscape within the TM channel to facilitate glucan translocation.

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来源期刊
Plant Molecular Biology
Plant Molecular Biology 生物-生化与分子生物学
自引率
2.00%
发文量
95
审稿时长
1.4 months
期刊介绍: Plant Molecular Biology is an international journal dedicated to rapid publication of original research articles in all areas of plant biology.The Editorial Board welcomes full-length manuscripts that address important biological problems of broad interest, including research in comparative genomics, functional genomics, proteomics, bioinformatics, computational biology, biochemical and regulatory networks, and biotechnology. Because space in the journal is limited, however, preference is given to publication of results that provide significant new insights into biological problems and that advance the understanding of structure, function, mechanisms, or regulation. Authors must ensure that results are of high quality and that manuscripts are written for a broad plant science audience.
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