[从废水中测序的病毒分子流行病学]。

IF 0.4 4区 医学 Q4 MEDICINE, RESEARCH & EXPERIMENTAL
M S-medecine Sciences Pub Date : 2025-06-01 Epub Date: 2025-07-07 DOI:10.1051/medsci/2025083
Juejun Chen, Sarah Aherfi, Pauline Steichen, Géraldine Rios, Rainer Waldmann, Pascal Barbry
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引用次数: 0

摘要

利用废水序列的宏基因组分析进行病毒监测似乎是一种很有前途的流行病学工具,可用于监测病毒在大量人群中的传播。它在COVID-19大流行期间的使用,使监测SARS-CoV-2的传播无需收集多个个体样本。这种方法可以以极具成本效益的方式监测有症状和无症状感染。最初基于PCR检测,核酸测序的引入通过提供更详细的宏基因组信息改进了这一工具。应对COVID-19大流行的经验表明,这一流行病学工具现在应推广到废水中可检测到的其他病毒。这篇综述讨论了所使用的不同方法,强调了在国际范围内快速部署以更好地了解病毒病原体的全球循环的挑战。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[Molecular epidemiology of viruses sequenced from wastewater].

Virus surveillance using metagenomic analysis of sequences from wastewater appears to be a promising epidemiological tool for monitoring the spread of viruses in large populations. Its use during the COVID-19 pandemic enabled the monitoring of SARS-CoV-2 circulation without requiring the collection of multiple individual samples. This approach allows both symptomatic and asymptomatic infections to be monitored in a highly cost-effective way. Initially based on PCR detection, the introduction of nucleic acid sequencing has improved this tool by providing more detailed metagenomic information. Experience with COVID-19 pandemics suggests that this epidemiological tool should now be extended to other viruses detectable in wastewater. This review discusses the different methods used, highlighting the challenges of a rapid deployment on an international scale to better understand the global circulation of viral pathogens.

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来源期刊
M S-medecine Sciences
M S-medecine Sciences 医学-医学:研究与实验
CiteScore
0.80
自引率
14.30%
发文量
182
审稿时长
4-8 weeks
期刊介绍: m/s offers high-quality review articles in French, covering all areas of biomedical and health research, in a monthly magazine format (10 issues / year). m/s is read by the whole French-speaking community, in France but also in Belgium, Switzerland, Canada, Morocco, Algeria, Tunisia etc. m/s is not a primary publication, and thus will not consider unpublished data. Most articles are invited by the Editors, but spontaneous proposals are welcomed. Each issue combines news and views on the most recent scientific publications, as well as broadly accessible and updated review articles on a specific topic, and essays on science and society, history of science, public health, or reactions to published articles. Each year, m/s also publishes one or two thematic issues focused on a research topic of high interest. All review articles and essays are peer-reviewed.
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