肝豆状核变性ATP7B变异的功能筛选揭示了残留的运输活性

IF 3.7 2区 医学 Q2 GENETICS & HEREDITY
Jenifer S. Calvo, Tomáš Heger, Ekaterina Kabin, William R. Mowrey, Guillermo Del Angel, Wei Ding, Svetlana Lutsenko
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引用次数: 0

摘要

Wilson病是一种铜(Cu)稳态紊乱,由铜转运体ATP7B的功能障碍和相关的铜在组织中的积累引起。ATP7B基因中存在超过700种与疾病相关的变异,以及广泛的疾病表现,使得分析基因型-表型相关性和开发更好的治疗方法变得复杂。为了协助这类研究,我们筛选了101个ATP7B变体,以检测缺乏活性atp依赖性铜转运体的人成纤维细胞的表达和铜转运活性。ClinVar数据库将其中59个分类为不确定意义的变异或具有相互冲突的致病性分类;6个变体不在数据库中。其中33种变体以前已经通过其他分析确定了特征。只有三种变体(S657R、G1061E和G1266R)导致Cu转运完全失活。这些突变体的计算机分析被用来解释这种对ATP7B活性的剧烈影响。剩余的ATP7B变体显示了一系列的Cu转运活动。不同性质变异的共表达产生的活性值不同于简单平均值。讨论了该功能屏的优点和局限性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Functional Screen of Wilson Disease ATP7B Variants Reveals Residual Transport Activities

Functional Screen of Wilson Disease ATP7B Variants Reveals Residual Transport Activities

Wilson disease is a disorder of copper (Cu) homeostasis caused by the malfunction of Cu transporter ATP7B and associated Cu accumulation in tissues. The existence of over 700 disease-associated variants in the ATP7B gene and a broad spectrum of disease manifestations complicate the analysis of genotype–phenotype correlations and the development of better treatments for this disorder. To assist such studies, we screen 101 variants of ATP7B for expression and Cu transport activity in human fibroblasts lacking active ATP-dependent Cu transporters. The ClinVar database classified 59 of these as variants of uncertain significance or having conflicting pathogenicity classifications; six variants were not in the database. Thirty-three of the variants have been previously characterized by other assays. Only three variants (S657R, G1061E, and G1266R) resulted in the complete inactivation of Cu transport. The in silico analysis of these mutants was used to rationalize this drastic effect on ATP7B activity. The remaining ATP7B variants showed a range of Cu transport activities. Coexpression of variants with different properties yielded activity values different from the simple average. The advantages and limitations of this functional screen are discussed.

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来源期刊
Human Mutation
Human Mutation 医学-遗传学
CiteScore
8.40
自引率
5.10%
发文量
190
审稿时长
2 months
期刊介绍: Human Mutation is a peer-reviewed journal that offers publication of original Research Articles, Methods, Mutation Updates, Reviews, Database Articles, Rapid Communications, and Letters on broad aspects of mutation research in humans. Reports of novel DNA variations and their phenotypic consequences, reports of SNPs demonstrated as valuable for genomic analysis, descriptions of new molecular detection methods, and novel approaches to clinical diagnosis are welcomed. Novel reports of gene organization at the genomic level, reported in the context of mutation investigation, may be considered. The journal provides a unique forum for the exchange of ideas, methods, and applications of interest to molecular, human, and medical geneticists in academic, industrial, and clinical research settings worldwide.
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