泰国血液分离约氏乳杆菌的全基因组测序:临床意义和公共卫生相关性

IF 1 Q3 MEDICINE, GENERAL & INTERNAL
Arnon Chukamnerd, Komwit Surachat, Sarunyou Chusri, Sorawit Chittrakarn
{"title":"泰国血液分离约氏乳杆菌的全基因组测序:临床意义和公共卫生相关性","authors":"Arnon Chukamnerd, Komwit Surachat, Sarunyou Chusri, Sorawit Chittrakarn","doi":"10.12659/AJCR.947564","DOIUrl":null,"url":null,"abstract":"<p><p>BACKGROUND Lactobacillus johnsonii is a probiotic bacterium commonly found in the gastrointestinal tracts of humans and other animals. It is non-pathogenic and plays a crucial role in maintaining gut health. L. johnsonii is often associated with beneficial effects on the host immune system and digestion.         However, reports of L. johnsonii infections are rare, and their clinical characteristics remain poorly understood. This article reports a case of L. johnsonii isolated from a patient's blood - the first such case documented in Thailand. Whole-genome sequencing (WGS) was performed on the isolate (LJ-PSU-blood) to investigate its genomic characteristics. CASE REPORT A 25-year-old Thai woman with a large abdominal mass was diagnosed with diffuse large B-cell lymphoma, and she was started on rituximab-cyclophosphamide, hydroxydaunorubicin, oncovin, and prednisolone chemotherapy. During her first rituximab infusion, she developed a fever, tachypnea, and tachycardia. Her blood cultures revealed an organism after 1 day. L. johnsonii was initially identified and subjected to WGS, and the sequence data were analyzed using bioinformatics tools. The findings demonstrated that the LJ-PSU-blood isolate possessed antibiotic resistance and virulence-associated genes. In addition, this isolate harbored bacteriocin-encoding genes and integrated bacteriophage sequences. Our genome was compared with 21 published genomes from various countries, hosts, and isolation sources. They were grouped into 3 monophyletic clades based on single-nucleotide polymorphism distances. CONCLUSIONS This case report describes the characteristics of L. johnsonii isolated from the blood of a Thai patient. Clinical and WGS data highlight important public health concerns associated with L. johnsonii infections.</p>","PeriodicalId":39064,"journal":{"name":"American Journal of Case Reports","volume":"26 ","pages":"e947564"},"PeriodicalIF":1.0000,"publicationDate":"2025-07-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Whole-Genome Sequencing of Blood-Isolated Lactobacillus johnsonii in Thailand: Clinical Implications and Public Health Relevance.\",\"authors\":\"Arnon Chukamnerd, Komwit Surachat, Sarunyou Chusri, Sorawit Chittrakarn\",\"doi\":\"10.12659/AJCR.947564\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>BACKGROUND Lactobacillus johnsonii is a probiotic bacterium commonly found in the gastrointestinal tracts of humans and other animals. It is non-pathogenic and plays a crucial role in maintaining gut health. L. johnsonii is often associated with beneficial effects on the host immune system and digestion.         However, reports of L. johnsonii infections are rare, and their clinical characteristics remain poorly understood. This article reports a case of L. johnsonii isolated from a patient's blood - the first such case documented in Thailand. Whole-genome sequencing (WGS) was performed on the isolate (LJ-PSU-blood) to investigate its genomic characteristics. CASE REPORT A 25-year-old Thai woman with a large abdominal mass was diagnosed with diffuse large B-cell lymphoma, and she was started on rituximab-cyclophosphamide, hydroxydaunorubicin, oncovin, and prednisolone chemotherapy. During her first rituximab infusion, she developed a fever, tachypnea, and tachycardia. Her blood cultures revealed an organism after 1 day. L. johnsonii was initially identified and subjected to WGS, and the sequence data were analyzed using bioinformatics tools. The findings demonstrated that the LJ-PSU-blood isolate possessed antibiotic resistance and virulence-associated genes. In addition, this isolate harbored bacteriocin-encoding genes and integrated bacteriophage sequences. Our genome was compared with 21 published genomes from various countries, hosts, and isolation sources. They were grouped into 3 monophyletic clades based on single-nucleotide polymorphism distances. CONCLUSIONS This case report describes the characteristics of L. johnsonii isolated from the blood of a Thai patient. Clinical and WGS data highlight important public health concerns associated with L. johnsonii infections.</p>\",\"PeriodicalId\":39064,\"journal\":{\"name\":\"American Journal of Case Reports\",\"volume\":\"26 \",\"pages\":\"e947564\"},\"PeriodicalIF\":1.0000,\"publicationDate\":\"2025-07-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"American Journal of Case Reports\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.12659/AJCR.947564\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"MEDICINE, GENERAL & INTERNAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"American Journal of Case Reports","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.12659/AJCR.947564","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"MEDICINE, GENERAL & INTERNAL","Score":null,"Total":0}
引用次数: 0

摘要

约氏乳杆菌是一种常见于人类和其他动物胃肠道的益生菌。它是非致病性的,在维持肠道健康方面起着至关重要的作用。约氏乳杆菌通常与宿主免疫系统和消化系统的有益作用有关。然而,约氏乳杆菌感染的报道是罕见的,他们的临床特征仍然知之甚少。本文报告了一例从患者血液中分离出的约氏乳杆菌,这是泰国记录的首例此类病例。对分离物(LJ-PSU-blood)进行全基因组测序(WGS),研究其基因组特征。病例报告:一名25岁的泰国女性腹部大肿块被诊断为弥漫性大b细胞淋巴瘤,她开始接受利图昔单抗-环磷酰胺、羟基柔红霉素、癌原霉素和强的松龙化疗。在她第一次输注利妥昔单抗时,她出现发烧、呼吸急促和心动过速。1天后,她的血培养发现了一种有机体。初步鉴定了约氏乳杆菌并进行了WGS,并利用生物信息学工具对序列数据进行了分析。结果表明,lj - psu血分离株具有抗生素耐药性和毒力相关基因。此外,该分离物含有细菌素编码基因和整合的噬菌体序列。将我们的基因组与来自不同国家、宿主和分离源的21个已发表的基因组进行比较。根据单核苷酸多态性距离将它们分为3个单系进化支。结论:本病例报告描述了从泰国患者血液中分离的约氏乳杆菌的特征。临床和WGS数据强调了与约氏乳杆菌感染相关的重要公共卫生问题。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Whole-Genome Sequencing of Blood-Isolated Lactobacillus johnsonii in Thailand: Clinical Implications and Public Health Relevance.

BACKGROUND Lactobacillus johnsonii is a probiotic bacterium commonly found in the gastrointestinal tracts of humans and other animals. It is non-pathogenic and plays a crucial role in maintaining gut health. L. johnsonii is often associated with beneficial effects on the host immune system and digestion.         However, reports of L. johnsonii infections are rare, and their clinical characteristics remain poorly understood. This article reports a case of L. johnsonii isolated from a patient's blood - the first such case documented in Thailand. Whole-genome sequencing (WGS) was performed on the isolate (LJ-PSU-blood) to investigate its genomic characteristics. CASE REPORT A 25-year-old Thai woman with a large abdominal mass was diagnosed with diffuse large B-cell lymphoma, and she was started on rituximab-cyclophosphamide, hydroxydaunorubicin, oncovin, and prednisolone chemotherapy. During her first rituximab infusion, she developed a fever, tachypnea, and tachycardia. Her blood cultures revealed an organism after 1 day. L. johnsonii was initially identified and subjected to WGS, and the sequence data were analyzed using bioinformatics tools. The findings demonstrated that the LJ-PSU-blood isolate possessed antibiotic resistance and virulence-associated genes. In addition, this isolate harbored bacteriocin-encoding genes and integrated bacteriophage sequences. Our genome was compared with 21 published genomes from various countries, hosts, and isolation sources. They were grouped into 3 monophyletic clades based on single-nucleotide polymorphism distances. CONCLUSIONS This case report describes the characteristics of L. johnsonii isolated from the blood of a Thai patient. Clinical and WGS data highlight important public health concerns associated with L. johnsonii infections.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
American Journal of Case Reports
American Journal of Case Reports Medicine-Medicine (all)
CiteScore
1.80
自引率
0.00%
发文量
599
期刊介绍: American Journal of Case Reports is an international, peer-reviewed scientific journal that publishes single and series case reports in all medical fields. American Journal of Case Reports is issued on a continuous basis as a primary electronic journal. Print copies of a single article or a set of articles can be ordered on demand.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信