准确而又负担得起:通过Pisa复合方案和局部校正模拟Criegee中间体的集成工具。

IF 5.7 1区 化学 Q2 CHEMISTRY, PHYSICAL
Journal of Chemical Theory and Computation Pub Date : 2025-07-22 Epub Date: 2025-07-03 DOI:10.1021/acs.jctc.5c00797
Luigi Crisci, Federico Lazzari, Vincenzo Barone
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引用次数: 0

摘要

甲烷中间体(CIs)是大气化学中的关键反应物质,在烯烃臭氧分解和二次有机气溶胶形成中起着核心作用。然而,它们的瞬态性质和非常规的电子结构对实验表征和理论建模都提出了严峻的挑战。在这项工作中,我们提出了一个基于Pisa复合方案(PCSs)和局部校正策略的集成且经济高效的计算平台,用于精确模拟CIs的结构和旋转常数。复合材料(包括多层)势能表面的几何优化是由一个新开发的界面实现的,该界面结合了不同量子化学代码的优势。对甲醛氧化物的半实验平衡结构进行基准测试,允许推导可转移的修正,将光谱精度扩展到更大的克里吉系统。我们还介绍了一个两层的onionm方案,在该方案中,通过定位在羰基氧化物部分上的更高级别修正来改进对整个分子的DFT描述。这种方法在环己酮氧化物上进行了验证,以完全高级优化的一小部分计算成本恢复了高水平的准确性。总的来说,我们的方法为Criegee中间体的光谱表征提供了一个强大的自动化框架,从而扩大了计算光谱在大气化学中的应用范围。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Accurate Yet Affordable: An Integrated Tool for the Simulation of Criegee Intermediates via Pisa Composite Schemes and Localized Corrections.

Criegee intermediates (CIs) are pivotal reactive species in atmospheric chemistry, playing a central role in alkene ozonolysis and secondary organic aerosol formation. However, their transient nature and unconventional electronic structure pose a serious challenge to both experimental characterization and theoretical modeling. In this work, we present an integrated and cost-effective computational platform for the accurate simulation of the structure and rotational constants of CIs, based on the Pisa Composite Schemes (PCSs) and localized correction strategies. Geometry optimizations on composite (including multilayer) potential energy surfaces are enabled by a newly developed interface that combines the strengths of different quantum chemistry codes. Benchmarking against the semiexperimental equilibrium structure of formaldehyde oxide allows the derivation of transferable corrections that extend the spectroscopic accuracy to larger Criegee systems. We also introduce a two-layer ONIOM scheme in which a DFT description of the full molecule is refined by higher-level corrections localized on the carbonyl oxide moiety. This approach, validated on cyclohexanone oxide, recovers high-level accuracy at a fraction of the computational cost of full high-level optimizations. Overall, our method provides a robust and automated framework for the spectroscopic characterization of Criegee intermediates, thereby broadening the reach of computational spectroscopy in atmospheric chemistry.

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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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