利用网络毒理学和分子对接技术鉴定器官移植受者他克莫司诱发震颤的核心靶点和通路。

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Chao Liu, Qian Chen, Fu Yan, Yulin Niu
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引用次数: 0

摘要

他克莫司是器官移植后最常用的免疫抑制剂,它与各种神经毒性作用有关,尤其是震颤,严重影响受者的生活质量。他克莫司诱发震颤的确切机制尚不清楚。为了研究这一点,我们采用网络毒理学和分子对接方法来确定潜在的靶点和途径。从PubChem数据库中检索他克莫司的SMILES表示,并使用ProTox-3.0和ADMETlab 3.0进行毒性预测。从公共数据库中确定了与他克莫司和震颤相关疾病相关的靶点。利用STRING和Cytoscape进行蛋白相互作用网络和功能富集分析。与CB-Dock2进行分子对接研究。共鉴定出43个与他克莫司暴露和震颤相关的潜在靶点,其中5个核心靶点通过STRING和Cytoscape分析筛选:AKT1、GBA、SCN8A、SCN2A和SCN4A。功能富集分析强调了他克莫司诱发震颤的几个关键通路,包括多巴胺能突触、帕金森病、Rap1信号通路、脊髓小脑共济失调和细胞凋亡。分子对接结果表明,在核心靶点中,他克莫司对SCN8A和SCN2A的结合亲和力最强。本研究提示他克莫司诱发的震颤可能与帕金森震颤密切相关,为了解他克莫司的神经毒性作用提供了理论基础。鉴于网络毒理学对其具体分子机制的研究有限,需要进一步的动物实验来详细阐明这些机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Using network toxicology and molecular docking to identify core targets and pathways underlying tacrolimus-induced tremor in organ transplant recipients.

Tacrolimus, the most commonly prescribed immunosuppressant following organ transplantation, is associated with various neurotoxic effects, notably tremor, which significantly impacts the quality of life of recipients. The precise mechanisms underlying tacrolimus-induced tremor remain unclear. To investigate this, we employed network toxicology and molecular docking methodologies to identify potential targets and pathways. The SMILES representation of tacrolimus was retrieved from the PubChem database, and toxicity predictions were performed using ProTox-3.0 and ADMETlab 3.0. Targets related to tacrolimus and tremor-associated diseases were identified from public databases. Protein-protein interaction networks and functional enrichment analyses were conducted using STRING and Cytoscape. Molecular docking studies were carried out with CB-Dock2. A total of 43 potential targets associated with tacrolimus exposure and tremor were identified, out of which five core targets were filtered through STRING and Cytoscape analyses: AKT1, GBA, SCN8A, SCN2A, and SCN4A. Functional enrichment analysis highlighted several critical pathways implicated in tacrolimus-induced tremor, including the Dopaminergic synapse, Parkinson's disease, Rap1 signaling pathway, Spinocerebellar ataxia, and Apoptosis. The results of molecular docking indicated that tacrolimus exhibits the strongest binding affinity toward SCN8A and SCN2A among the core targets. This study suggests that tacrolimus-induced tremor may be closely linked to parkinsonian tremor and provides a theoretical foundation for understanding the neurotoxic effects of tacrolimus. Given the limited research in network toxicology on the specific molecular mechanisms involved, further animal studies are warranted to elucidate these mechanisms in detail.

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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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