基于IPCL和AVA模式预测食管鳞状细胞癌浸润深度的可解释半监督模型。

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Liumin Kang, Jinzhou Zhu, Haoxiang Ni, Shiqi Zhu, Lihe Liu, Jiaxi Lin, Yu Wang, Xiaohua Shi, Rui Li
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引用次数: 0

摘要

食管鳞状细胞癌(ESCC)侵袭深度的评估对其治疗策略至关重要。然而,应用基于血管内乳头状细胞层(IPCL)和无血管区(AVA)模式的日本内镜学会分类系统,需要对内镜医师进行长期培训。我们的目标是建立基于IPCL/AVA模式的可解释的半监督模型来预测ESCC的入侵深度。上游任务自监督对比学习(n = 2175)和下游任务微调(n = 468)共2643张窄带成像放大内窥镜图像来自苏州。在微调中,采用了两种方法:传统的黑盒或可解释的人工智能。最后,在外部测试数据集(金坛,n = 60)中对模型进行评估,并与两名内窥镜医师进行比较。主要终点为ESCC侵袭深度的三向分类。这些指标包括准确性、马修相关系数和科恩kappa。此外,Grad-CAM用于图像的可视化解释;对分类器进行局部解释、特征重要性和部分依赖图;t-SNE用于特征向量的可视化。例外骨架可解释模型(准确率0.817)比其他模型和初级内窥镜医师(0.733)表现得更好,尽管它的准确率比高级内窥镜医师(0.883)低0.066。然而,人工智能辅助内镜医师的表现有所提高(初级0.833,高级0.917)。可解释的半监督框架使人工智能模型能够实现更高的透明度和性能,以应对传统监督学习的不透明性和有限数量的标记内窥镜图像。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Explainable semi-supervised model for predicting invasion depth of esophageal squamous cell carcinoma based on the IPCL and AVA patterns.

Explainable semi-supervised model for predicting invasion depth of esophageal squamous cell carcinoma based on the IPCL and AVA patterns.

Explainable semi-supervised model for predicting invasion depth of esophageal squamous cell carcinoma based on the IPCL and AVA patterns.

Explainable semi-supervised model for predicting invasion depth of esophageal squamous cell carcinoma based on the IPCL and AVA patterns.

Evaluation of invasion depth is essential for the treatment strategy of esophageal squamous cell carcinoma (ESCC). However, the application of the Japanese Endoscopic Society classification system, based on the patterns of intravascular papillary cell layer (IPCL) and avascular area (AVA), requires a long-term training for endoscopists. We aimed to develop explainable semi-supervised models for predicting ESCC invasion depth based on the IPCL/AVA patterns. A total of 2,643 images of magnifying endoscopy with narrow-band imaging in the upstream task, self-supervised contrastive learning (n = 2,175), and the downstream task, fine-tuning (n = 468), were from Suzhou. In the fine-tuning, two approaches were adopted: the traditional blackbox or the explainable AI. Lastly, the models were evaluated in an external test dataset (Jintan, n = 60), in comparison with two endoscopists. The primary outcome was 3-way classification of ESCC invasion depth. The metrics included accuracy, Matthew correlation coefficient, and Cohen's kappa. Furthermore, Grad-CAM was for visualized explanation of images; local interpretation, feature importance, and partial dependence plots were conducted for classifiers; and t-SNE was for visualization of feature vectors. A Xception-backboned explainable model (accuracy 0.817) had exhibited better performance than other models and a junior endoscopist (0.733), even though it underperformed a senior (0.883) by 0.066 on accuracy. However, the endoscopists' performance was improved by AI assistance (junior 0.833 and senior 0.917). The explainable semi-supervised framework empowers AI models to achieve improved transparentness and performance, facing the opacity of traditional supervised learning and limited amounts of labelled endoscopic images.

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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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