花生ERFs的全基因组鉴定及AhERF28在盐和干旱胁迫下的功能表征

IF 5.3 2区 生物学 Q1 PLANT SCIENCES
Haohong Tang, Haonan Shi, Qian-Hao Zhu, Zhaojie He, Xiaohu Ma, Kai Wang, Feng Liu, Shuaishuai Cheng, Xianpeng Xiong, Jie Sun
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引用次数: 0

摘要

关键信息:在栽培花生中鉴定出116个ERF成员。综合分析表明,AhERF28是花生对盐胁迫和干旱胁迫响应的关键因子。乙烯响应因子(Ethylene response factor, ERF)属于AP2/ERF (APETALA2/ERF)超家族,广泛参与植物对干旱、盐胁迫等多种非生物胁迫的响应。虽然ERF家族的成员在许多植物物种中都有报道,但花生ERF家族的成员和功能在很大程度上是未知的。本研究通过花生(arachhis hypogaea L.)全基因组鉴定,共鉴定出116个erf。花生ERF可分为ERF亚家族和DREB亚家族。通过系统发育树分析,将116个erf划分为11个不同的亚群,同一亚群中的基因具有保守的基序、外显子编码序列和结构域。ERF家族基因在22个组织中表现出差异表达。进一步分析表明,aherf的启动子中含有多种顺式作用元件。其中,与发育、激素和非生物/生物胁迫相关的元素分别为6个、11个和15个。此外,通过分析盐处理和干旱处理下的转录组数据以及aherf的qRT-PCR验证,发现盐处理和干旱处理后AhERF28的表达水平均升高。进一步的研究表明,沉默AhERF28可以增强花生对盐和干旱胁迫的耐受性,这可能是由于活性氧清除能力的增强。本研究确定了栽培花生中的ERF成员,揭示了AhERF28在盐胁迫和干旱胁迫中的潜在作用,为理解ERF在花生非生物胁迫响应中的功能提供了新的视角,并为作物改良提供了理论依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genome-wide identification of peanut ERFs and functional characterization of AhERF28 in response to salt and drought stresses.

Key message: Genome-wide identified 116 ERF members in cultivated peanut. Comprehensive analysis shows that AhERF28 is the key factor for peanut in its response to salt and drought stresses. Ethylene response factor (ERF) belongs to the AP2/ERF (APETALA2/ERF) superfamily, which is widely involved in plant responses to various abiotic stresses, including drought and salt stresses. Although members of the ERF family have been reported in multiple plant species, the members and functions of the peanut ERF family are largely unknown. In this study, a total of 116 ERFs were identified in peanut (Arachis hypogaea L.) via genome-wide identification. The peanut ERFs were classified into ERF and DREB subfamilies. Through phylogenetic tree analysis, the 116 ERFs were divided into 11 different subgroups, and the genes in the same group had conserved motifs, exon coding sequences, and domains. The ERF family genes demonstrated differential expression across 22 tissues. Further analysis revealed that AhERFs contain a variety of cis-acting elements in their promoters. Among them, there are 6, 11, and 15 elements related to development, hormones, and abiotic/biotic stress, respectively. In addition, by analyzing the transcriptome data under salt and drought treatments and qRT-PCR verification of AhERFs, it was found that the expression level of AhERF28 increased after both salt and drought treatments. Further research indicates that silencing AhERF28 enhanced the tolerance of peanut to salt and drought stress, likely due to an increased capacity of ROS scavenging. This study identified the ERF members in the cultivated peanut and revealed the potential role of AhERF28 in salt and drought stresses, which provides a new perspective for understanding the functions of ERFs in peanut response to abiotic stress processes and a theoretical basis for crop improvement.

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来源期刊
Plant Cell Reports
Plant Cell Reports 生物-植物科学
CiteScore
10.80
自引率
1.60%
发文量
135
审稿时长
3.2 months
期刊介绍: Plant Cell Reports publishes original, peer-reviewed articles on new advances in all aspects of plant cell science, plant genetics and molecular biology. Papers selected for publication contribute significant new advances to clearly identified technological problems and/or biological questions. The articles will prove relevant beyond the narrow topic of interest to a readership with broad scientific background. The coverage includes such topics as: - genomics and genetics - metabolism - cell biology - abiotic and biotic stress - phytopathology - gene transfer and expression - molecular pharming - systems biology - nanobiotechnology - genome editing - phenomics and synthetic biology The journal also publishes opinion papers, review and focus articles on the latest developments and new advances in research and technology in plant molecular biology and biotechnology.
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