盐胁迫下甘蓝型油菜转录因子MYC2的生物信息学分析及表达

IF 3.1 4区 生物学 Q1 GENETICS & HEREDITY
Alireza Mirzaei, Jamshid Fooladi, Bahman Fazeli-Nasab, Mansour Ghorbanpour
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引用次数: 0

摘要

盐胁迫是限制植物生长的重要因素,可严重降低作物产量。除了造成生理损伤外,盐胁迫还会破坏植物的内部平衡,阻碍营养吸收。然而,植物已经发展出各种反应来对抗这种压力。本研究重点关注茉莉酸途径相关的一个关键基因BnMYC2,该基因在增强耐盐性中起重要作用。BnMYC2基因通过结合特定的顺式作用元件区域激活下游基因,从而有助于植物抵御盐胁迫的能力。研究了盐胁迫下Licord栽培品种根、茎、叶中BnMYC2基因的表达。实验完全随机设计,重复3次。我们的研究结果表明,BnMYC2基因在根中的表达高于茎和叶。值得注意的是,盐胁迫12 h后,BnMYC2基因在根系的表达量达到峰值,随后下降。生物信息学分析表明,BnMYC2基因与拟南芥中16个基因和甘氨酸中8个基因具有系统发育相似性。此外,拟南芥MYC2基因的表达谱与G. max基因组相似度为72.22%。总的来说,本研究不仅突出了MYC2基因在耐盐性中的作用,而且为BnMYC2基因的进化方面提供了有价值的见解,这对未来基因组分析相关的研究有益。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Bioinformatics analysis and expression of the transcription factor MYC2 in Brassica napus in response to salt stress.

Salt stress is a significant factor limiting plant growth and can severely reduce crop yields. In addition to causing physiological damage, salt stress disrupts the plant's internal balance and hinders nutrient absorption. However, plants have developed various responses to combat this stress. This study focuses on one critical gene associated with the jasmonic acid pathway, known as BnMYC2, which plays an important role in enhancing salt resistance. The BnMYC2 gene activates downstream genes by binding to specific cis-acting element regions, thereby contributing to the plant's ability to withstand salt stress. We investigated the expression of the BnMYC2 gene in the roots, stems, and leaves of the Licord cultivar under salt stress. The experiment was designed completely randomly, with three replications. Our results indicate that BnMYC2 gene expression is higher in the roots compared to the stems and leaves. Notably, the expression level of the BnMYC2 gene peaked in the roots 12 h after the application of salt stress before subsequently decreasing. Bioinformatics analysis revealed that the BnMYC2 gene shares phylogenetic similarities with 16 genes in Arabidopsis thaliana and 8 genes in Glycine max. Additionally, the expression profile of the MYC2 gene in A. thaliana is 72.22% similar to that in the G. max genome. Overall, this research not only highlights the role of the MYC2 gene in salt tolerance but also provides valuable insights into the evolutionary aspects of the BnMYC2 gene, which can be beneficial for future studies related to genome analysis.

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来源期刊
CiteScore
3.50
自引率
3.40%
发文量
92
审稿时长
2 months
期刊介绍: Functional & Integrative Genomics is devoted to large-scale studies of genomes and their functions, including systems analyses of biological processes. The journal will provide the research community an integrated platform where researchers can share, review and discuss their findings on important biological questions that will ultimately enable us to answer the fundamental question: How do genomes work?
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