应用LC-MS和网络药理学相结合的方法预测血府助瘀丸治疗术后认知功能障碍的质量指标

IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS
Mingxin Guo, Jiaqi Zeng, Sang Xu, Xia Wu, Zhiqiang Hu, Xuping Wang, Liangliang Wang
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引用次数: 0

摘要

本研究旨在基于LC-MS分析血府助瘀丸(XZW)的化学成分,并通过网络药理学探讨XZW治疗术后认知功能障碍(POCD)的作用机制,并识别其潜在质量标记(Q-marker)。用LC-MS分析XZW的化学成分,用SwissTargetPrediction预测相应的靶标。然后通过GeneCards、OMIM、PharmGKB和TTD数据库获取POCD靶点,利用Cytoscape 3.9.1绘制“components-targets”和protein-protein interaction (PPI)图谱。利用微信息技术实现GO和KEGG富集分析的可视化。最后,通过分子对接对网络药理学预测内容进行初步验证。用液相色谱-质谱法鉴定了18个化合物。SwissTargetPrediction预测了443个化合物目标。其中,药物与疾病之间有352个共同靶点。利用Cytoscape 3.9.1软件对其主要活性成分进行筛选,筛选出叶黄素E、甘草素、除虫菊酯、皂角苷、异甘草素、prunasin、meranzin、ligusliide、异甘醇、二丁基酚。PPI分析确定前10位核心蛋白为:甘油醛-磷酸脱氢酶(GAPDH)、蛋白激酶B (AKT1)、肿瘤坏死因子(TNF)、src蛋白(src)、表皮生长因子受体(EGFR)、caspase 3 (CASP3)、雌激素受体(ESR1)、前列腺素过氧化物酶合成酶2 (PTGS2)、基质金属酶9 (MMP9)和转录因子(JUN)。KEGG富集分析发现166条通路,包括神经活性配体-受体相互作用通路。分子对接表明,活性组分与核心靶点具有良好的亲和力。预测利尿素、异糖甘氨酸、茶叶苷和芍药苷可作为XZW治疗POCD的q标记物。初步分析了XZW的化学成分,并对其可能的药效物质及其治疗POCD的作用机制进行了探讨。预测XZW治疗POCD的q标记物,为其临床应用及药物开发提供依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Predicting Quality Markers of Xuefu Zhuyu Wan for Postoperative Cognitive Dysfunction Using Integrated LC–MS Analysis and Network Pharmacology

The study aims to analyze the chemical constituents of Xuefu Zhuyu Wan (XZW) based on LC–MS and explore the mechanism of XZW in treating postoperative cognitive dysfunction (POCD) through network pharmacology and identify its potential quality marker (Q-marker). The chemical components of XZW were analyzed by LC–MS, and the corresponding targets were predicted by SwissTargetPrediction. Then POCD targets were obtained by GeneCards, OMIM, PharmGKB, and TTD database, and the “components-targets” and protein–protein interaction (PPI) maps were drawn by Cytoscape 3.9.1. The visualization of GO and KEGG enrichment analysis was obtained by micro-information. Finally, the content of network pharmacology prediction was preliminarily verified by molecular docking. Eighteen compounds were identified in XZW using LC–MS. SwissTargetPrediction predicted 443 compound targets. Among these, there are 352 common targets between the drug and the disease. Using Cytoscape 3.9.1, the main active components were screened as inophyllum E, liquiritigenin, pyrethrin, albiflorin, isoliquiritigenin, prunasin, meranzin, ligustilide, isoglycyrol, and dibutylphenol. PPI analysis identified the top 10 core proteins as: glyceraldehyde-phosphate dehydrogenase (GAPDH), protein kinase B (AKT1), tumor necrosis factor (TNF), src protein (SRC), epidermal growth factor receptor (EGFR), caspase 3 (CASP3), estrogen receptor (ESR1), prostaglandin peroxidase synthase 2 (PTGS2), matrix metalloenzyme 9 (MMP9), and transcription factor (JUN). KEGG enrichment analysis revealed 166 pathways, including the neuroactive ligand–receptor interaction pathway. Molecular docking shows that the active components have a good affinity with the core targets. It is predicted that liquiritigenin, isoglycyrol, inophyllum, and albiflorin could serve as Q-marker for XZW in the treatment of POCD. The chemical constituents of XZW were obtained by preliminary analysis, and the possible pharmacodynamic substances and their mechanism in treating POCD were discussed. The Q-marker of XZW in treating POCD was predicted, which provided basis for its clinical application and drug development.

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来源期刊
Biomedical Chromatography
Biomedical Chromatography 生物-分析化学
CiteScore
3.60
自引率
5.60%
发文量
268
审稿时长
2.3 months
期刊介绍: Biomedical Chromatography is devoted to the publication of original papers on the applications of chromatography and allied techniques in the biological and medical sciences. Research papers and review articles cover the methods and techniques relevant to the separation, identification and determination of substances in biochemistry, biotechnology, molecular biology, cell biology, clinical chemistry, pharmacology and related disciplines. These include the analysis of body fluids, cells and tissues, purification of biologically important compounds, pharmaco-kinetics and sequencing methods using HPLC, GC, HPLC-MS, TLC, paper chromatography, affinity chromatography, gel filtration, electrophoresis and related techniques.
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