膝关节软骨t1Ρ成像的系统后处理方法

J. Zhong , Y. Yao , F. Xiao , T.Y.M. Ong , K.W.K. Ho , S. Li , C. Huang , Q. Chan , J.F. Griffith , W. Chen
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引用次数: 0

摘要

ρ成像是膝关节MRI评估OA的一项新兴技术。这种方式具有独特的成像生化成分的能力,如蛋白多糖,有助于早期发现和治疗后监测膝关节OA。然而,与T1ρ成像相关的一个重大挑战在于其后处理的复杂性,其中包括参数拟合,软骨分割和分区域分割。目的:本文提出了一种利用深度学习和先进计算技术实现膝关节T1ρ MRI后处理自动化的系统方法。我们的方法自动化了膝关节T1ρ MRI后处理的三个主要步骤,并提供了膝关节股骨和胫骨软骨20个亚区的平均T1ρ值(图)。在我们的实验中,我们利用4张T1ρ加权图像生成了30例OA患者(67.63±5.80岁,BMI 26.00±4.08 kg/m2)和10名健康志愿者(24.90±2.59岁,BMI 22.75±4.51 kg/m2)的T1ρ图。对于每个受试者,使用300 Hz的自旋锁定频率和0、10、30和50 ms的自旋锁定次数获得4张t1 ρ加权图像,分辨率为0.8 × 1 × 3 mm³,得到的图像矩阵大小为44 × 256 × 256。自旋锁制备后进行FSE读数,TE/TR = 31/2000 ms。此外,我们计算了四个t1ρ加权图像的平均值,并将该平均值用于自动软骨分割和子区域分割。我们使用经过所有40名受试者训练的nnU-Net进行软骨分割,而子区域分割使用我们之前发表的基于规则的方法CartiMorph进行。使用骰子系数相似度(DSC)、均方根偏差(RMSD)和RMSD方差系数(CVRMSD)来评估使用深度学习分割方法的性能。在亚区域分析中,我们排除了3例OA患者,其中一个软骨区域(FC、MTC或LTC)的完全软骨损失超过50%。结果实验结果表明,该方法具有良好的性能。OA患者和健康志愿者的FC、MTC和LTC的平均DSC值分别为0.83、0.80和0.82。表2提供了跨20个子区域的T1ρ量化协议绩效指标的全面细分。结论提出了一种系统的膝关节T1ρ MRI数据后处理方法。实验结果证明了该方法的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A SYSTEMATIC POST-PROCESSING APPROACH FOR T1Ρ IMAGING OF KNEE ARTICULAR CARTILAGE

INTRODUCTION

T imaging is an emerging technique in knee MRI for the evaluation of OA. This modality possesses the unique capability to image biochemical components, such as proteoglycans, facilitating early detection and post-treatment monitoring of knee OA. However, a significant challenge associated with T imaging lies in the complexity of its post-processing, which encompasses parameter fitting, cartilage segmentation, and subregional parcellation.

OBJECTIVE

This abstract presents a systematic methodology for automating knee T MRI post-processing by leveraging deep learning and advanced computational techniques.

METHODS

Our methodology automated the three primary steps of T knee MRI post-processing and provided the mean T values for 20 subregions of the femoral and tibial cartilage in the knee (Figure). In our experiments, we utilized four T-weighted images to generate the T map for 30 OA patients (age 67.63±5.80 years, BMI 26.00±4.08 kg/m2) and 10 healthy volunteers (age 24.90±2.59 years, BMI 22.75±4.51 kg/m2). For each subject, four T-weighted images were acquired using a spin-lock frequency of 300 Hz and spin-lock times of 0, 10, 30, and 50 ms, with a resolution of 0.8 × 1 × 3 mm³, resulting in an image matrix size of 44 × 256 × 256 . The spin-lock preparation was followed by an FSE readout with TE/TR = 31/2000 ms. Additionally, we computed the mean of the four T-weighted images and employed this mean for automated cartilage segmentation and subregion parcellation. We employed a nnU-Net trained with all 40 subjects for cartilage segmentation, while subregion parcellation was conducted using our previously published rule-based method, CartiMorph. The performance of the approach using deep learning segmentation was assessed using the Dice Coefficient Similarity (DSC), the root-mean-squared deviation (RMSD), and the coefficient of variance of RMSD (CVRMSD) against the manual segmentation. We excluded 3 OA patients with full cartilage loss above 50% of one cartilage area (FC, MTC, or LTC) in subregion analysis.

RESULTS

Our experimental results demonstrated the satisfactory performance of our proposed approach. The mean DSC values for the FC, MTC and LTC in OA patients and healthy volunteers were 0.83, 0.80, and 0.82, respectively. Table 2 provides a comprehensive breakdown of the performance metrics of the agreement in T quantification across 20 subregions.

CONCLUSION

We proposed a systematic approach for post-processing knee T MRI data. The experimental results demonstrated the efficacy of the proposed approach.
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Osteoarthritis imaging
Osteoarthritis imaging Radiology and Imaging
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