J. Zhong , Y. Yao , F. Xiao , T.Y.M. Ong , K.W.K. Ho , S. Li , C. Huang , Q. Chan , J.F. Griffith , W. Chen
{"title":"膝关节软骨t1Ρ成像的系统后处理方法","authors":"J. Zhong , Y. Yao , F. Xiao , T.Y.M. Ong , K.W.K. Ho , S. Li , C. Huang , Q. Chan , J.F. Griffith , W. Chen","doi":"10.1016/j.ostima.2025.100332","DOIUrl":null,"url":null,"abstract":"<div><h3>INTRODUCTION</h3><div>T<sub>1ρ</sub> imaging is an emerging technique in knee MRI for the evaluation of OA. This modality possesses the unique capability to image biochemical components, such as proteoglycans, facilitating early detection and post-treatment monitoring of knee OA. However, a significant challenge associated with T<sub>1ρ</sub> imaging lies in the complexity of its post-processing, which encompasses parameter fitting, cartilage segmentation, and subregional parcellation.</div></div><div><h3>OBJECTIVE</h3><div>This abstract presents a systematic methodology for automating knee T<sub>1ρ</sub> MRI post-processing by leveraging deep learning and advanced computational techniques.</div></div><div><h3>METHODS</h3><div>Our methodology automated the three primary steps of T<sub>1ρ</sub> knee MRI post-processing and provided the mean T<sub>1ρ</sub> values for 20 subregions of the femoral and tibial cartilage in the knee (Figure). In our experiments, we utilized four T<sub>1ρ</sub>-weighted images to generate the T<sub>1ρ</sub> map for 30 OA patients (age 67.63±5.80 years, BMI 26.00±4.08 kg/m<sup>2</sup>) and 10 healthy volunteers (age 24.90±2.59 years, BMI 22.75±4.51 kg/m<sup>2</sup>). For each subject, four T<sub>1ρ</sub>-weighted images were acquired using a spin-lock frequency of 300 Hz and spin-lock times of 0, 10, 30, and 50 ms, with a resolution of 0.8 × 1 × 3 mm³, resulting in an image matrix size of 44 × 256 × 256 . The spin-lock preparation was followed by an FSE readout with TE/TR = 31/2000 ms. Additionally, we computed the mean of the four T<sub>1ρ</sub>-weighted images and employed this mean for automated cartilage segmentation and subregion parcellation. We employed a nnU-Net trained with all 40 subjects for cartilage segmentation, while subregion parcellation was conducted using our previously published rule-based method, CartiMorph. The performance of the approach using deep learning segmentation was assessed using the Dice Coefficient Similarity (DSC), the root-mean-squared deviation (RMSD), and the coefficient of variance of RMSD (CV<sub>RMSD</sub>) against the manual segmentation. We excluded 3 OA patients with full cartilage loss above 50% of one cartilage area (FC, MTC, or LTC) in subregion analysis.</div></div><div><h3>RESULTS</h3><div>Our experimental results demonstrated the satisfactory performance of our proposed approach. The mean DSC values for the FC, MTC and LTC in OA patients and healthy volunteers were 0.83, 0.80, and 0.82, respectively. Table 2 provides a comprehensive breakdown of the performance metrics of the agreement in T<sub>1ρ</sub> quantification across 20 subregions.</div></div><div><h3>CONCLUSION</h3><div>We proposed a systematic approach for post-processing knee T<sub>1ρ</sub> MRI data. The experimental results demonstrated the efficacy of the proposed approach.</div></div>","PeriodicalId":74378,"journal":{"name":"Osteoarthritis imaging","volume":"5 ","pages":"Article 100332"},"PeriodicalIF":0.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A SYSTEMATIC POST-PROCESSING APPROACH FOR T1Ρ IMAGING OF KNEE ARTICULAR CARTILAGE\",\"authors\":\"J. Zhong , Y. Yao , F. Xiao , T.Y.M. Ong , K.W.K. Ho , S. Li , C. Huang , Q. Chan , J.F. Griffith , W. Chen\",\"doi\":\"10.1016/j.ostima.2025.100332\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>INTRODUCTION</h3><div>T<sub>1ρ</sub> imaging is an emerging technique in knee MRI for the evaluation of OA. This modality possesses the unique capability to image biochemical components, such as proteoglycans, facilitating early detection and post-treatment monitoring of knee OA. However, a significant challenge associated with T<sub>1ρ</sub> imaging lies in the complexity of its post-processing, which encompasses parameter fitting, cartilage segmentation, and subregional parcellation.</div></div><div><h3>OBJECTIVE</h3><div>This abstract presents a systematic methodology for automating knee T<sub>1ρ</sub> MRI post-processing by leveraging deep learning and advanced computational techniques.</div></div><div><h3>METHODS</h3><div>Our methodology automated the three primary steps of T<sub>1ρ</sub> knee MRI post-processing and provided the mean T<sub>1ρ</sub> values for 20 subregions of the femoral and tibial cartilage in the knee (Figure). In our experiments, we utilized four T<sub>1ρ</sub>-weighted images to generate the T<sub>1ρ</sub> map for 30 OA patients (age 67.63±5.80 years, BMI 26.00±4.08 kg/m<sup>2</sup>) and 10 healthy volunteers (age 24.90±2.59 years, BMI 22.75±4.51 kg/m<sup>2</sup>). For each subject, four T<sub>1ρ</sub>-weighted images were acquired using a spin-lock frequency of 300 Hz and spin-lock times of 0, 10, 30, and 50 ms, with a resolution of 0.8 × 1 × 3 mm³, resulting in an image matrix size of 44 × 256 × 256 . The spin-lock preparation was followed by an FSE readout with TE/TR = 31/2000 ms. Additionally, we computed the mean of the four T<sub>1ρ</sub>-weighted images and employed this mean for automated cartilage segmentation and subregion parcellation. We employed a nnU-Net trained with all 40 subjects for cartilage segmentation, while subregion parcellation was conducted using our previously published rule-based method, CartiMorph. The performance of the approach using deep learning segmentation was assessed using the Dice Coefficient Similarity (DSC), the root-mean-squared deviation (RMSD), and the coefficient of variance of RMSD (CV<sub>RMSD</sub>) against the manual segmentation. We excluded 3 OA patients with full cartilage loss above 50% of one cartilage area (FC, MTC, or LTC) in subregion analysis.</div></div><div><h3>RESULTS</h3><div>Our experimental results demonstrated the satisfactory performance of our proposed approach. The mean DSC values for the FC, MTC and LTC in OA patients and healthy volunteers were 0.83, 0.80, and 0.82, respectively. Table 2 provides a comprehensive breakdown of the performance metrics of the agreement in T<sub>1ρ</sub> quantification across 20 subregions.</div></div><div><h3>CONCLUSION</h3><div>We proposed a systematic approach for post-processing knee T<sub>1ρ</sub> MRI data. The experimental results demonstrated the efficacy of the proposed approach.</div></div>\",\"PeriodicalId\":74378,\"journal\":{\"name\":\"Osteoarthritis imaging\",\"volume\":\"5 \",\"pages\":\"Article 100332\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Osteoarthritis imaging\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2772654125000728\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Osteoarthritis imaging","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2772654125000728","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
A SYSTEMATIC POST-PROCESSING APPROACH FOR T1Ρ IMAGING OF KNEE ARTICULAR CARTILAGE
INTRODUCTION
T1ρ imaging is an emerging technique in knee MRI for the evaluation of OA. This modality possesses the unique capability to image biochemical components, such as proteoglycans, facilitating early detection and post-treatment monitoring of knee OA. However, a significant challenge associated with T1ρ imaging lies in the complexity of its post-processing, which encompasses parameter fitting, cartilage segmentation, and subregional parcellation.
OBJECTIVE
This abstract presents a systematic methodology for automating knee T1ρ MRI post-processing by leveraging deep learning and advanced computational techniques.
METHODS
Our methodology automated the three primary steps of T1ρ knee MRI post-processing and provided the mean T1ρ values for 20 subregions of the femoral and tibial cartilage in the knee (Figure). In our experiments, we utilized four T1ρ-weighted images to generate the T1ρ map for 30 OA patients (age 67.63±5.80 years, BMI 26.00±4.08 kg/m2) and 10 healthy volunteers (age 24.90±2.59 years, BMI 22.75±4.51 kg/m2). For each subject, four T1ρ-weighted images were acquired using a spin-lock frequency of 300 Hz and spin-lock times of 0, 10, 30, and 50 ms, with a resolution of 0.8 × 1 × 3 mm³, resulting in an image matrix size of 44 × 256 × 256 . The spin-lock preparation was followed by an FSE readout with TE/TR = 31/2000 ms. Additionally, we computed the mean of the four T1ρ-weighted images and employed this mean for automated cartilage segmentation and subregion parcellation. We employed a nnU-Net trained with all 40 subjects for cartilage segmentation, while subregion parcellation was conducted using our previously published rule-based method, CartiMorph. The performance of the approach using deep learning segmentation was assessed using the Dice Coefficient Similarity (DSC), the root-mean-squared deviation (RMSD), and the coefficient of variance of RMSD (CVRMSD) against the manual segmentation. We excluded 3 OA patients with full cartilage loss above 50% of one cartilage area (FC, MTC, or LTC) in subregion analysis.
RESULTS
Our experimental results demonstrated the satisfactory performance of our proposed approach. The mean DSC values for the FC, MTC and LTC in OA patients and healthy volunteers were 0.83, 0.80, and 0.82, respectively. Table 2 provides a comprehensive breakdown of the performance metrics of the agreement in T1ρ quantification across 20 subregions.
CONCLUSION
We proposed a systematic approach for post-processing knee T1ρ MRI data. The experimental results demonstrated the efficacy of the proposed approach.