基于Seq2Seq的多尺度特征混合感知手足口病多区域预测

IF 2.6 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
PLoS ONE Pub Date : 2025-06-27 eCollection Date: 2025-01-01 DOI:10.1371/journal.pone.0326206
Bingbing Lei, Xuanjun Zhu, Tao Zhou, Yuxi Zhang
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引用次数: 0

摘要

手足口病的准确预测是有效预防和控制疫情的关键。现有的手足口病预测模型往往忽略了手足口病的跨区域传播动态,限制了其对单一地区的适用性。此外,它们整体感知时空特征的能力仍然有限,阻碍了对流行病趋势的精确建模。为了解决这些局限性,提出了一种基于序列到序列(Sequence-to-Sequence, Seq2Seq)框架的手足口病预测模型Seq2Seq- hmf。该模型利用了多尺度特征的混合感知。首先,该模型利用图结构建模对多区域流行病相关特征进行建模。其次,设计了一种新的时空并行编码(STPE)单元;多个STPE细胞构成一个编码器,能够跨多尺度时空特征进行混合感知。在该编码器中,基于图的特征表示和迭代卷积操作能够捕获相邻区域跨时间和空间维度的累积影响,从而促进高效提取多个区域之间的时空依赖关系。最后,解码器采用频率增强信道注意机制(FECAM)来提高模型对时间相关性和周期特征的理解,进一步提高预测精度和多步预测能力。利用来自日本的多区域数据提前1 - 4周预测手足口病病例的实验结果表明,我们提出的Seq2Seq-HMF模型优于基线模型。此外,该模型在中国南方某城市的单区域数据上表现良好,证实了其较强的泛化能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Harnessing hybrid perception on multi-scale features for hand-foot-mouth disease multi-region prediction based on Seq2Seq.

Accurate prediction of Hand, Foot, and Mouth Disease (HFMD) is crucial for effective epidemic prevention and control. Existing prediction models often overlook the cross-regional transmission dynamics of HFMD, limiting their applicability to single regions. Furthermore, their ability to perceive spatio-temporal features holistically remains limited, hindering the precise modeling of epidemic trends. To address these limitations, a novel HFMD prediction model named Seq2Seq-HMF is proposed, which is based on the Sequence-to-Sequence(Seq2Seq) framework. This model leverages hybrid perception of multi-scale features. First, the model utilizes graph structure modeling for multi-regional epidemic-related features. Secondly, a novel Spatio-Temporal Parallel Encoding(STPE) Cell is designed; multiple STPE Cells constitute an encoder capable of hybrid perception across multi-scale spatio-temporal features. Within this encoder, graph-based feature representation and iterative convolution operations enable the capture of cumulative influence of neighboring regions across temporal and spatial dimensions, facilitating efficient extraction of spatio-temporal dependencies between multiple regions. Finally, the decoder incorporates a frequency-enhanced channel attention mechanism(FECAM) to improve the model's comprehension of temporal correlations and periodic features, further refining prediction accuracy and multi-step forecasting capabilities. Experimental results, utilizing multi-regional data from Japan to predict HFMD cases one to four weeks ahead, demonstrate that our proposed Seq2Seq-HMF model outperforms baseline models. Additionally, the model performs well on single-region data from a city in southern China, confirming its strong generalization ability.

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来源期刊
PLoS ONE
PLoS ONE 生物-生物学
CiteScore
6.20
自引率
5.40%
发文量
14242
审稿时长
3.7 months
期刊介绍: PLOS ONE is an international, peer-reviewed, open-access, online publication. PLOS ONE welcomes reports on primary research from any scientific discipline. It provides: * Open-access—freely accessible online, authors retain copyright * Fast publication times * Peer review by expert, practicing researchers * Post-publication tools to indicate quality and impact * Community-based dialogue on articles * Worldwide media coverage
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