气滞平衡体质女大学生循环外泌体microrna的高通量测序分析

IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS
Yunan Zhang, Yali Zhou, Pengfei Zhao, Yuxiu Sun, Yini Li, Lichun Tian, Jianhua Zhen, Guangrui Huang
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引用次数: 0

摘要

简介:中医理论将个体体质分为九种类型,气滞体质(QSC)表现为气循环紊乱,易患情绪障碍和癌症。然而,QSC作为主要影响女性的病前状态,其生物学基础及其对相关疾病的易感机制尚不清楚。外泌体microRNAs (Exosomal microRNAs, miRNAs)是基因表达和细胞间通讯的稳定调控因子,miRNAs的分析使我们能够更好地了解QSC。本研究通过高通量测序对QSC和平衡体质(BC)女性的血浆外泌体mirna进行分析,旨在鉴定QSC潜在的生物标志物,揭示其易感疾病的生物学基础和发病机制。方法:采用横断面观察方法,按照《中医体质分类与测定》中的QSC和BC标准招募女大学生。从血浆中分离外泌体mirna,然后使用高通量测序进行分析。差异表达miRNAs (DEMs)鉴定为>2倍变化,P < 0.05,并筛选作为生物标志物构建受试者工作特征(ROC)曲线。根据已发表的数据,这些生物标志物在不同类型癌症中的诊断价值也得到了验证。基于预测的靶基因,探索KEGG和GO功能分析。结果:QSC患者的白蛋白(ALB)和碱性磷酸酶(ALP)浓度明显高于BC患者,但两组间基线信息及其他临床指标无显著差异。共鉴定出54个dem,其中QSC组有30 30个上调mirna, 24个下调mirna。7例特异性上调的dem的ROC曲线下面积(AUC)均为1.0,其中6例不同癌症的dem的AUC均在0.9以上。富集的KEGG通路包括“信号转导”、“传染病”和“癌症”,关联最多的系统包括免疫、内分泌和神经系统,而GO功能主要富集在“蛋白结合”、“细胞核”和“转录、dna模板化”。讨论:这7个潜在的QSC生物标志物已被证实通过上皮-间质转换调节和代谢重编程来调节致癌过程,其中1还可以通过降低5-羟色胺1A受体的表达来改善抑郁症。本研究结果加深了对中药体质的认识。然而,单性别的小样本限制了结论的应用,未来仍需要包括两性在内的大规模临床队列。结论:外泌体mirna在QSC中的表达表现出独特的特征,具有作为生物标志物的潜力,相关功能变化可能是QSC易感疾病的生物学基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Profiles of Circulating Exosomal microRNAs in Female College Students with Qi Stagnation and Balanced Constitutions by High-Throughput Sequencing.

Introduction: Individual constitutions are classified into nine types in traditional Chinese medical theory, and qi stagnation constitution (QSC) manifests as disrupted Qi circulation and increased susceptibility to emotional disorders and cancers. However, as a pre-disease state mainly affecting women, the biological basis of QSC and its susceptible mechanism to related diseases are still unclear. Exosomal microRNAs (miRNAs) are the stable regulators of gene expression and intercellular communication, and analysis of miRNAs enables us to understand the QSC better. This study profiles plasma exosomal miRNAs in QSC and balanced constitution (BC) females via high-throughput sequencing, aiming to identify the potential biomarkers of QSC and reveal its biological basis and the mechanism of its susceptible disease.

Methods: In this cross-sectional observation, female college students were recruited according to the criterion of QSC and BC in Classification and Determination of Constitution in TCM. Exosomal miRNAs were isolated from blood plasma and then profiled using high-throughput sequencing. Differentially expressed miRNAs (DEMs) were identified with fold change > 2 and P < 0.05, and screened as biomarkers to construct the receiver operating characteristic (ROC) curve. The diagnostic values of these biomarkers in different types of cancers were also validated based on the published data. KEGG and GO functional analysis were explored based on the predicted target genes.

Results: Subjects with QSC showed significantly higher concentrations of albumin (ALB) and alkaline phosphatase (ALP) compared to those with BC, while there was no significant difference in baseline information and other clinical indicators between groups. A total of 54 DEMs were identified, including 30 30 up-regulated and 24 down-regulated miRNAs in the QSC group. The area under the ROC curve (AUC) for 7 specific up-regulated DEMs was 1.0, as well as the AUCs for therein 6 DEMs in various cancers were all above 0.9. The enriched KEGG pathways included "signal transduction," "infectious disease," and "cancers", and the most associating systems included immune, endocrine, and nervous systems, while the GO function was mainly enriched in "protein binding," "nucleus" and "transcription, DNA-templated".

Discussion: These 7 potential biomarkers of QSC have been confirmed to regulate oncogenic processes through epithelial-mesenchymal transition modulation and metabolic reprogramming, as well as therein 1 can also improve depression by lowering the expression of 5-hydroxytryptamine 1A receptor. The results of this study deepen the understanding of the traditional Chinese medicine constitutions. However, the small single-sex sample limits the application of the conclusion, and a large-scale clinical cohort including both sexes is still needed in future.

Conclusion: The expression of exosomal miRNAs in QSC showed unique features that have the potential to serve as biomarkers, and the related functional changes might be the biological basis for the susceptible diseases of QSC.

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来源期刊
CiteScore
3.10
自引率
5.60%
发文量
327
审稿时长
7.5 months
期刊介绍: Combinatorial Chemistry & High Throughput Screening (CCHTS) publishes full length original research articles and reviews/mini-reviews dealing with various topics related to chemical biology (High Throughput Screening, Combinatorial Chemistry, Chemoinformatics, Laboratory Automation and Compound management) in advancing drug discovery research. Original research articles and reviews in the following areas are of special interest to the readers of this journal: Target identification and validation Assay design, development, miniaturization and comparison High throughput/high content/in silico screening and associated technologies Label-free detection technologies and applications Stem cell technologies Biomarkers ADMET/PK/PD methodologies and screening Probe discovery and development, hit to lead optimization Combinatorial chemistry (e.g. small molecules, peptide, nucleic acid or phage display libraries) Chemical library design and chemical diversity Chemo/bio-informatics, data mining Compound management Pharmacognosy Natural Products Research (Chemistry, Biology and Pharmacology of Natural Products) Natural Product Analytical Studies Bipharmaceutical studies of Natural products Drug repurposing Data management and statistical analysis Laboratory automation, robotics, microfluidics, signal detection technologies Current & Future Institutional Research Profile Technology transfer, legal and licensing issues Patents.
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