探讨m6A修饰在脓毒性急性呼吸窘迫综合征中的潜在机制:生物信息学分析。

IF 2.5 3区 生物学
Shaoyang Zhang, Qinghui Fu, Zhipeng Xu, Mingjie Fu, Jianfeng Zhao, Wenqiao Yu
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引用次数: 0

摘要

背景:急性呼吸窘迫综合征(ARDS)仍然是重症监护病房死亡的主要原因。n6 -甲基腺苷(m6A) mRNA的修饰在各种病理条件下都是至关重要的,但其在ARDS微环境中的作用,特别是在单细胞水平上,仍然知之甚少。方法:单细胞和大量rna测序数据来自GEO数据库。采用生物信息学和实验方法研究m6A调节因子与中枢基因在ARDS中的关系。结果:WTAP、HNRNPA2B1和HNRNPC在ARDS微环境中广泛表达。共识聚类分析将脓毒症患者分为不同的亚组,WTAP在这些组中显示显着差异。加权基因共表达网络分析(加权基因共表达网络分析,WGCNA)发现棕色模块与WTAP最相关,揭示了5个枢纽基因。验证实验证实WTAP和MYC在肺组织中高表达。功能分析进一步表明WTAP促进ARDS进展。结论:生物信息学分析和初步实验数据提示WTAP通过调节m6A甲基化和促进免疫细胞浸润促进ARDS的发生和进展。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Exploring the potential mechanisms of m6A modification in septic acute respiratory distress syndrome: a bioinformatics analysis.

Background: Acute respiratory distress syndrome (ARDS) remains a leading cause of mortality in intensive care units. The N6-methyladenosine (m6A) mRNA modification is critical in various pathological conditions, yet its role in the ARDS microenvironment, particularly at the single-cell level, remains poorly understood.

Methods: Single-cell and bulk RNA-sequencing datasets were sourced from the GEO databases. Bioinformatics and experimental approaches were employed to investigate the associations between m6A regulators and hub genes in ARDS.

Results: WTAP, HNRNPA2B1, and HNRNPC exhibited extensive expression within the ARDS microenvironment. Consensus clustering analysis segregated patients with sepsis into distinct subgroups, with WTAP showing significant variation across these groups. Weighted gene co-expression network analysis (WGCNA) identified the brown module as most associated with WTAP, revealing five hub genes. Validation experiments confirmed high expression levels of WTAP and MYC in lung tissues. Functional assays further demonstrated that WTAP enhances ARDS progression.

Conclusions: In conclusion, bioinformatics analysis and preliminary experimental data suggest that WTAP promotes ARDS onset and progression by regulating m6A methylation and facilitating immune cell infiltration.

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来源期刊
Hereditas
Hereditas Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.80
自引率
3.70%
发文量
0
期刊介绍: For almost a century, Hereditas has published original cutting-edge research and reviews. As the Official journal of the Mendelian Society of Lund, the journal welcomes research from across all areas of genetics and genomics. Topics of interest include human and medical genetics, animal and plant genetics, microbial genetics, agriculture and bioinformatics.
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