{"title":"在Toto脂肪细胞分析中使用亲水组织清除、薄片显微镜和基于深度学习的图像处理","authors":"Dylan Le Jan, Manar Harb, Mohamed Siliman Misha, Jean-Claude Desfontis, Yassine Mallem, Laurence Dubreil","doi":"10.1111/boc.70013","DOIUrl":null,"url":null,"abstract":"<div>\n \n \n <section>\n \n <h3> Background Information</h3>\n \n <p>Obesity is a multifactorial metabolic disease characterized by excessive fat storage in adipocytes, particularly in visceral adipose tissue (VAT) like mesenteric adipocytes. Metabolic dysfunctions due to obesity are often associated with modification of adipocyte volume. Various techniques for measuring adipocyte size are described in the literature, including classical histological methods on paraffin-embedded tissue sections or dissociation of adipose tissue (AT) using collagenase with artifacts due to AT post treatment.</p>\n </section>\n \n <section>\n \n <h3> Results</h3>\n \n <p>This study aims to develop and implement an innovative method for 3D investigation of AT to assess adipocyte volume, overcoming the limitations and biases inherent in traditional techniques. The principle of the method relies on fluorescent labeling of lipids and extracellular matrix (ECM) in toto within AT, followed by a tissue clearing step without delipidation and imaging using 3D light sheet microscopy coupled with automated analysis of adipocyte size through a deep learning approach. By this work we showed that the volume of adipocytes increased in mesenteric AT from obese rats with an increase in the distance between adipocytes.</p>\n </section>\n \n <section>\n \n <h3> Conclusion and Significance</h3>\n \n <p>The current work highlights the interest in combining AT clearing without a delipidation step and light sheet microscopy for in toto 3D adipocyte characterization in obese versus healthy rats. While this method is particularly valuable for understanding adipocyte hypertrophy in the context of obesity, its applicability extends beyond this area. This innovative approach offers valuable opportunities for investigating adipocyte dynamics in various pathological conditions, evaluating the impact of nutritional interventions, and assessing the effectiveness of pharmacological treatments.</p>\n </section>\n </div>","PeriodicalId":8859,"journal":{"name":"Biology of the Cell","volume":"117 6","pages":""},"PeriodicalIF":2.4000,"publicationDate":"2025-06-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/boc.70013","citationCount":"0","resultStr":"{\"title\":\"In Toto Adipocytes Analysis Using Hydrophilic Tissue Clearing, Light Sheet Microscopy, and Deep Learning-Based Image Processing\",\"authors\":\"Dylan Le Jan, Manar Harb, Mohamed Siliman Misha, Jean-Claude Desfontis, Yassine Mallem, Laurence Dubreil\",\"doi\":\"10.1111/boc.70013\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n \\n <section>\\n \\n <h3> Background Information</h3>\\n \\n <p>Obesity is a multifactorial metabolic disease characterized by excessive fat storage in adipocytes, particularly in visceral adipose tissue (VAT) like mesenteric adipocytes. Metabolic dysfunctions due to obesity are often associated with modification of adipocyte volume. Various techniques for measuring adipocyte size are described in the literature, including classical histological methods on paraffin-embedded tissue sections or dissociation of adipose tissue (AT) using collagenase with artifacts due to AT post treatment.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Results</h3>\\n \\n <p>This study aims to develop and implement an innovative method for 3D investigation of AT to assess adipocyte volume, overcoming the limitations and biases inherent in traditional techniques. The principle of the method relies on fluorescent labeling of lipids and extracellular matrix (ECM) in toto within AT, followed by a tissue clearing step without delipidation and imaging using 3D light sheet microscopy coupled with automated analysis of adipocyte size through a deep learning approach. By this work we showed that the volume of adipocytes increased in mesenteric AT from obese rats with an increase in the distance between adipocytes.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Conclusion and Significance</h3>\\n \\n <p>The current work highlights the interest in combining AT clearing without a delipidation step and light sheet microscopy for in toto 3D adipocyte characterization in obese versus healthy rats. While this method is particularly valuable for understanding adipocyte hypertrophy in the context of obesity, its applicability extends beyond this area. This innovative approach offers valuable opportunities for investigating adipocyte dynamics in various pathological conditions, evaluating the impact of nutritional interventions, and assessing the effectiveness of pharmacological treatments.</p>\\n </section>\\n </div>\",\"PeriodicalId\":8859,\"journal\":{\"name\":\"Biology of the Cell\",\"volume\":\"117 6\",\"pages\":\"\"},\"PeriodicalIF\":2.4000,\"publicationDate\":\"2025-06-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1111/boc.70013\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biology of the Cell\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/boc.70013\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"CELL BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biology of the Cell","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/boc.70013","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CELL BIOLOGY","Score":null,"Total":0}
In Toto Adipocytes Analysis Using Hydrophilic Tissue Clearing, Light Sheet Microscopy, and Deep Learning-Based Image Processing
Background Information
Obesity is a multifactorial metabolic disease characterized by excessive fat storage in adipocytes, particularly in visceral adipose tissue (VAT) like mesenteric adipocytes. Metabolic dysfunctions due to obesity are often associated with modification of adipocyte volume. Various techniques for measuring adipocyte size are described in the literature, including classical histological methods on paraffin-embedded tissue sections or dissociation of adipose tissue (AT) using collagenase with artifacts due to AT post treatment.
Results
This study aims to develop and implement an innovative method for 3D investigation of AT to assess adipocyte volume, overcoming the limitations and biases inherent in traditional techniques. The principle of the method relies on fluorescent labeling of lipids and extracellular matrix (ECM) in toto within AT, followed by a tissue clearing step without delipidation and imaging using 3D light sheet microscopy coupled with automated analysis of adipocyte size through a deep learning approach. By this work we showed that the volume of adipocytes increased in mesenteric AT from obese rats with an increase in the distance between adipocytes.
Conclusion and Significance
The current work highlights the interest in combining AT clearing without a delipidation step and light sheet microscopy for in toto 3D adipocyte characterization in obese versus healthy rats. While this method is particularly valuable for understanding adipocyte hypertrophy in the context of obesity, its applicability extends beyond this area. This innovative approach offers valuable opportunities for investigating adipocyte dynamics in various pathological conditions, evaluating the impact of nutritional interventions, and assessing the effectiveness of pharmacological treatments.
期刊介绍:
The journal publishes original research articles and reviews on all aspects of cellular, molecular and structural biology, developmental biology, cell physiology and evolution. It will publish articles or reviews contributing to the understanding of the elementary biochemical and biophysical principles of live matter organization from the molecular, cellular and tissues scales and organisms.
This includes contributions directed towards understanding biochemical and biophysical mechanisms, structure-function relationships with respect to basic cell and tissue functions, development, development/evolution relationship, morphogenesis, stem cell biology, cell biology of disease, plant cell biology, as well as contributions directed toward understanding integrated processes at the organelles, cell and tissue levels. Contributions using approaches such as high resolution imaging, live imaging, quantitative cell biology and integrated biology; as well as those using innovative genetic and epigenetic technologies, ex-vivo tissue engineering, cellular, tissue and integrated functional analysis, and quantitative biology and modeling to demonstrate original biological principles are encouraged.