一种计算效率高的粘弹性真核细胞模型。

IF 5.4 2区 医学 Q3 ENGINEERING, BIOMEDICAL
Pietro Miotti, Matteo Scarpone, Chwee Teck Lim, Igor V. Pivkin
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引用次数: 0

摘要

目的:模拟真核细胞在微流体装置和毛细管网络中的流动可以帮助评估细胞力学如何影响其行为。由于细胞的粘弹性特性及其大量变形的能力,研究细胞流变学需要既详细又计算效率高的模型。我们提出了一个粗粒度模型来模拟真核细胞在流动中的力学,重点是细胞膜、细胞核和细胞骨架的建模。方法:细胞和核膜用表面三角形表示,捕捉膜的粘性和弹性特性。为了保持计算效率,同时保留重现整个细胞粘弹性行为的能力,通过使用粘弹性键来降低细胞骨架模型的复杂性。采用耗散粒子动力学进行流动模拟;然而,该模型适用于许多现有的基于连续体和颗粒的方法。结果:利用乳腺上皮细胞(MCF-10A)的微管抽吸和微流体实验数据对细胞模型进行了校准和验证。结论:我们相信简单性和准确性之间的平衡使所提出的模型成为模拟真核细胞流动力学的有价值的工具,使模拟速度更快,同时也简化了参数化过程。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Computationally Efficient Viscoelastic Eukaryotic Cell Model

Purpose

Modeling eukaryotic cell flow in microfluidic devices and capillary networks can be instrumental in assessing how cell mechanics influence its behavior. Due to the viscoelastic characteristics of cells and their capacity for substantial deformation, models that are both detailed and computationally efficient are necessary to explore cell rheology. We present a coarse-grained model for simulating the mechanics of eukaryotic cells in flow, with a focus on the modeling of cell membrane, nucleus, and cytoskeleton.

Methods

The cell and nucleus membranes are represented using surface triangulation, capturing both viscous and elastic properties of the membranes. To maintain computational efficiency while retaining the ability to reproduce the viscoelastic behavior of the entire cell, the complexity of the cytoskeleton model is reduced through the use of the viscoelastic bonds. Dissipative Particle Dynamics is employed to facilitate flow simulations; however, the model is suitable for use in many existing continuum and particle-based methods.

Results

The cell model is calibrated and validated using experimental data from micropipette aspiration and microfluidic experiments involving breast epithelial cells (MCF-10A).

Conclusion

We believe the balance between simplicity and accuracy makes the proposed model a valuable tool for simulating eukaryotic cell mechanics in flow, enabling faster simulations, while also simplifying the parameterization procedure.

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来源期刊
Annals of Biomedical Engineering
Annals of Biomedical Engineering 工程技术-工程:生物医学
CiteScore
7.50
自引率
15.80%
发文量
212
审稿时长
3 months
期刊介绍: Annals of Biomedical Engineering is an official journal of the Biomedical Engineering Society, publishing original articles in the major fields of bioengineering and biomedical engineering. The Annals is an interdisciplinary and international journal with the aim to highlight integrated approaches to the solutions of biological and biomedical problems.
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