利用拉曼光谱鉴定胶质瘤的一种新的IagPLS基线校正方法。

IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL
Yiran Shao, Lipu Zhou, Yan Zhou, Yibo Li and Qingbo Li
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引用次数: 0

摘要

胶质瘤作为中枢神经系统最具侵袭性的恶性肿瘤,迫切需要术中实时分子诊断技术来克服常规病理的侵袭性局限性和影像学的不确定性。虽然拉曼光谱可以提供非侵入性的生物分子指纹信息,但其信号容易受到组织自身荧光引起的基线漂移的干扰,导致光谱的有效信息被掩盖。现有的基线校正方法(如多项式拟合和非对称最小二乘)难以平衡噪声抑制、特征保留和适应异质组织光谱的挑战。在这项研究中,我们提出了一种改进的自适应梯度衍生惩罚最小二乘(IagPLS)方法,该方法集成了三种创新机制:曲率驱动的动态正则化,通过梯度敏感的惩罚项动态调整平滑强度,在抑制高频噪声的同时保护富含生物标志物的区域;基于SHAP算法的特征保护,识别和诊断关键的拉曼峰,构建区域特定的权重约束,避免过平滑;量子启发的全局优化,将权重更新建模为隧道势阱模型,并使用蒙特卡罗模拟退火策略跳出局部最优。通过对423张临床拉曼光谱(157个正常组织/266个胶质瘤组织)的验证,IagPLS显示出明显的优势:经随机森林分类后,其校正光谱的胶质瘤识别准确率达到96.1%(肿瘤F1评分为0.97),明显优于airPLS(89.4%)和agdPLS(87.0%)。关键指标表明,IagPLS处理过程中光谱的特征峰突出度比agdPLS提高了82.05%,负残余面积比airPLS减少了89.79%,处理速度比airPLS提高了43.64%。SHAP可解释性分析证实,受保护的生物标记区域对分类贡献了1.07倍,并且与胶质瘤特异性光谱特征高度兼容。该算法的单次校正用时不到0.1秒,结合了生物可解释性和优越的光谱校正,为术中光学活检系统提供了可靠的预处理工具。其算法框架可扩展到近红外、中红外光谱等多模态生物医学光谱分析,推动精密医学复杂光谱预处理技术的创新。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A novel IagPLS baseline correction method for glioma identification using Raman spectroscopy

A novel IagPLS baseline correction method for glioma identification using Raman spectroscopy

As the most aggressive malignant tumours of the central nervous system, gliomas urgently require real-time intraoperative molecular diagnostic techniques to overcome the invasive limitations of conventional pathology and the uncertainties of imaging. Although Raman spectroscopy can provide non-invasive biomolecular fingerprinting information, its signal is susceptible to interference from baseline drift caused by tissue autofluorescence, resulting in masking of the effective information of the spectrum. Existing baseline correction methods (e.g., polynomial fitting and asymmetric least squares) struggle to balance the challenges of noise suppression, feature preservation, and adaptation to heterogeneous tissue spectra. In this study, we propose an improved adaptive gradient-derived penalized least squares (IagPLS) method that integrates three innovative mechanisms: curvature-driven dynamic regularization, which dynamically adjusts the smoothing intensity through a gradient-sensitive penalty term and protects biomarker-rich regions while suppressing high-frequency noise; SHAP algorithm-guided feature protection, which identifies and diagnoses key Raman peaks and constructs region-specific weight constraints to avoid oversmoothing; and quantum-inspired global optimization, which models the weight update as a tunnelling potential well model and uses a Monte Carlo simulated annealing strategy to jump out of the local optimum. Based on the validation of 423 clinical Raman spectra (157 normal tissues/266 glioma tissues), IagPLS showed a significant advantage: the glioma identification accuracy of its corrected spectra reached 96.1% (tumour F1 score: 0.97) after random forest classification, which was significantly better than that of airPLS (89.4%) and agdPLS (87.0%). The key indicators show that the feature peak prominence of the spectra during IagPLS processing is improved by 82.05% compared to agdPLS, the negative residual area is reduced by 89.79% compared to airPLS, and the processing speed is improved by 43.64% compared to airPLS. SHAP interpretability analysis confirmed that the protected biomarker regions contributed 1.07-fold to classification and were highly compatible with glioma-specific spectral features. The algorithm takes less than 0.1 seconds for a single correction, combining biological interpretability with superior spectral correction to provide a reliable pre-processing tool for intraoperative optical biopsy systems. Its algorithmic framework can be extended to multimodal biomedical spectral analysis, such as near-infrared and mid-infrared spectroscopy, to promote the innovation of complex spectral pre-processing technology in precision medicine.

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来源期刊
Analytical Methods
Analytical Methods CHEMISTRY, ANALYTICAL-FOOD SCIENCE & TECHNOLOGY
CiteScore
5.10
自引率
3.20%
发文量
569
审稿时长
1.8 months
期刊介绍: Early applied demonstrations of new analytical methods with clear societal impact
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