韩国濒危种毛茛（Ranunculus kadzusensis Makino 1929）叶绿体全基因组序列及系统发育分析。

IF 0.5 4区生物学 Q4 GENETICS & HEREDITY

Mitochondrial DNA. Part B, Resources Pub Date : 2025-06-17 eCollection Date: 2025-01-01 DOI:10.1080/23802359.2025.2519219

I-Jin Choi, Hey-Min Park, Wan-Hee Lee, Mi-Sung Park

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引用次数: 0

摘要

毛茛（Ranunculus kadzusensis Makino 1929）是朝鲜半岛濒危特有种之一。kadzusensis的完整叶绿体长度为158,301 bp，具有典型的四分体结构，由一个大的单拷贝区（84,973 bp），一个小的单拷贝区（17,638 bp）和两个反向重复区组成，每个区域的长度为27,845 bp。总GC含量为37.83%，基因组共编码113个基因，其中蛋白编码基因79个，tRNA基因30个，rRNA基因4个。系统发育分析表明，kadzusr与北京毛茛（Ranunculus beijing ensis）和黄毛茛（Ranunculus bungei）亲缘关系较近。该叶绿体基因组丰富了毛茛属植物的基因组信息，也将为毛茛科植物的遗传分类提供依据。

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The complete chloroplast genome sequence and phylogenetic analysis of Ranunculus kadzusensis Makino 1929, an endangered species in Korea.

Ranunculus kadzusensis Makino 1929 is one of the endangered endemic species on the Korean Peninsula. The complete chloroplast of R. kadzusensis is 158,301 bp in length with a typical quadripartite structure comprised of a large single-copy region (84,973 bp), a small single-copy region (17,638 bp), and two inverted repeat regions, each 27,845 bp in length. The overall GC content is 37.83%, the genome encoded a total of 113 genes, comprising 79 protein-encoding genes, 30 tRNA, and four rRNA genes. Phylogenetic analysis indicated that R. kadzusensis was closely related to Ranunculus pekinensis and Ranunculus bungei. This chloroplast genome enriches Ranunculus's genome information and will also be valid for the species' genetic classification in the family Ranunculaceae.

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来源期刊

Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology

CiteScore

1.30

自引率

20.00%

发文量

670

期刊介绍： This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.