Salinibacterium, Leifsonia, Diaminobutyricibacter, antiququbacter, Homoserinimonas和glacibacter的分类重排:精化属边界和提出两个新属- Orlajensenia gen. nov和Leifsonella gen. nov。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Maher Gtari, Dhouha Boussoufa, Faten Ghodhbane-Gtari, Imed Sbissi
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引用次数: 0

摘要

放线菌科微杆菌科由多种革兰氏阳性菌组成,具有高G+C含量和复杂的分类挑战。传统的多相方法,基于16S rRNA系统发育和表型性状,在某些情况下导致多系分类分组,需要全基因组方法来更好地解决进化关系。本研究采用分类基因组学方法,结合16S rRNA基因测序、核心蛋白系统发育、平均氨基酸特征和保守蛋白百分比,对Leifsonia属、Salinibacterium属、Homoserinimonas属、glacibacter属、Antiquaquibacter属和Diaminobutyricibacter属进行了重新评估。研究结果显示,在Leifsonia, glacibacter和Salinibacterium中存在显著的多菌性,表明生态趋同而不是共同的祖先。建议的分类修订包括:将solinibacterium soli和Salinibacterium metalliresistant重新分类为antiquaqubacter,将hongtaonis Salinibacterium和沉淀物Salinibacterium沉淀物Salinibacterium重新分类为Homoserinimonas,将Leifsonia psych耐受性和Leifsonia kafniensis重新分类为glacibacter。通永二氨基丁酸杆菌应归入雷氏杆菌。此外,红色Leifsonia rubra被重新分配到Salinibacterium。我们还提出了包含“Leifsonia flava”和glacibacter flavus的两个新属(命名为Orlajensenia gen. 11)和包含Leifsonella gen. 11(命名为Leifsonella gen. 11)的另一个新属(命名为Leifsonella bigeumensis)。这些基于基因组的见解为微细菌科的分类提供了一个完善的框架,增强了我们对其进化和生态作用的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Taxonomic rearrangement of Salinibacterium, Leifsonia, Diaminobutyricibacter, Antiquaquibacter, Homoserinimonas and Glaciibacter: refining genus boundaries and proposal of two new genera - Orlajensenia gen. nov. and Leifsonella gen. nov.

The actinobacterial family Microbacteriaceae comprises a diverse group of Gram-positive bacteria with high G+C content and complex taxonomic challenges. Traditional polyphasic approaches, based on 16S rRNA phylogeny and phenotypic traits, have in some instances resulted in polyphyletic taxonomic groupings, necessitating genome-wide methodologies to better resolve evolutionary relationships. This study employs a taxogenomic approach - incorporating 16S rRNA gene sequencing, core protein phylogeny, average amino acid identity and percentage of conserved proteins - to reassess the genera Leifsonia, Salinibacterium, Homoserinimonas, Glaciibacter, Antiquaquibacter and Diaminobutyricibacter. The findings reveal significant polyphyly in Leifsonia, Glaciibacter and Salinibacterium, indicating ecological convergence rather than shared ancestry. Proposed taxonomic revisions include the reclassification of Salinibacterium soli and Salinibacterium metalliresistens into Antiquaquibacter, Salinibacterium hongtaonis and Salinibacterium sedimenticola into Homoserinimonas, and Leifsonia psychrotolerans and Leifsonia kafniensis into Glaciibacter. Diaminobutyricibacter tongyongensis should be incorporated into Leifsonia. Additionally, Leifsonia rubra is reassigned to Salinibacterium. Two new genera were also proposed to encompass "Leifsonia flava" and Glaciibacter flavus, named Orlajensenia gen. nov. and another to encompass Leifsonia bigeumensis, named Leifsonella gen. nov. These genome-based insights provide a refined framework for the taxonomy of Microbacteriaceae, enhancing our understanding of their evolutionary and ecological roles.

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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